- Author:
- David Nickerson <david.nickerson@gmail.com>
- Date:
- 2021-09-16 22:58:39+12:00
- Desc:
- adding final jupyter notebook and an HTML export
- Permanent Source URI:
- https://models.physiomeproject.org/workspace/a1/rawfile/fd13124bd991717939abd81526061362045b09d8/tutorial/TNNP-S1S2-600.xml
<?xml version="1.0" encoding="iso-8859-1"?>
<model
name="tnnp_s1s2_restitution_protocol"
cmeta:id="tnnp_s1s2_restitution_protocol"
xmlns="http://www.cellml.org/cellml/1.1#"
xmlns:cellml="http://www.cellml.org/cellml/1.1#"
xmlns:cmeta="http://www.cellml.org/metadata/1.0#"
xmlns:xlink="http://www.w3.org/1999/xlink">
<rdf:RDF
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:cmeta="http://www.cellml.org/metadata/1.0#"
xmlns:bqs="http://www.cellml.org/bqs/1.0#"
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#"
xmlns:cs="http://www.cellml.org/metadata/simulation/1.0#"
xmlns:cg="http://www.cellml.org/metadata/graphs/1.0#">
<rdf:Description rdf:about="">
<dc:creator rdf:parseType="Resource">
<vCard:N rdf:parseType="Resource">
<vCard:Family>Nickerson</vCard:Family>
<vCard:Given>David</vCard:Given>
</vCard:N>
<vCard:EMAIL rdf:parseType="Resource">
<rdf:value>david.nickerson@nus.edu.sg</rdf:value>
<rdf:type rdf:resource="http://imc.org/vCard/3.0#internet"/>
</vCard:EMAIL>
<vCard:ORG rdf:parseType="Resource">
<vCard:Orgname>National University of Singapore</vCard:Orgname>
<vCard:Orgunit>Division of Bioengineering</vCard:Orgunit>
</vCard:ORG>
</dc:creator>
<dcterms:created rdf:parseType="Resource">
<dcterms:W3CDTF>2007-04-24</dcterms:W3CDTF>
</dcterms:created>
<dc:publisher>
Division of Bioengineering, National University of Singapore
</dc:publisher>
</rdf:Description>
<rdf:Description rdf:about="#tnnp_s1s2_restitution_protocol_VALUE">
<cs:simulation>
<rdf:Description rdf:ID="simulation">
<cs:simulationName>S1S2</cs:simulationName>
<cs:multistepMethod>bdf</cs:multistepMethod>
<cs:iterationMethod>newton</cs:iterationMethod>
<cs:linearSolver>dense</cs:linearSolver>
<cs:boundIntervals rdf:parseType="Collection">
<rdf:Description>
<cs:boundVariable>
<rdf:Description rdf:about="http://www.bioeng.nus.edu.sg/compbiolab/papers/nickerson-PBMB-2008/experiments/TNNP-S1S2.xml#time"/>
</cs:boundVariable>
<cs:maximumStepSize
rdf:datatype="http://www.w3.org/2001/XMLSchema#double">
0.5
</cs:maximumStepSize>
<cs:tabulationStepSize
rdf:datatype="http://www.w3.org/2001/XMLSchema#double">
5.0
</cs:tabulationStepSize>
<cs:startingValue
rdf:datatype="http://www.w3.org/2001/XMLSchema#double">
0
</cs:startingValue>
<cs:endingValue
rdf:datatype="http://www.w3.org/2001/XMLSchema#double">
11e3
</cs:endingValue>
</rdf:Description>
</cs:boundIntervals>
</rdf:Description>
</cs:simulation>
</rdf:Description>
</rdf:RDF>
<import xlink:href="http://www.bioeng.nus.edu.sg/compbiolab/cellml/models/common/units.xml">
<units name="ms" units_ref="ms"/>
</import>
<import xlink:href="http://www.bioeng.nus.edu.sg/compbiolab/papers/nickerson-PBMB-2008/experiments/TNNP-S1S2.xml">
<component name="S1S2" component_ref="interface"/>
</import>
<component name="params" cmeta:id="params">
<variable name="basicCycleLength" initial_value="1000" public_interface="out" units="ms"/>
<variable name="S2Interval" initial_value="600" public_interface="out" units="ms"/>
</component>
<connection>
<map_components component_1="params" component_2="S1S2"/>
<map_variables variable_1="basicCycleLength" variable_2="basicCycleLength"/>
<map_variables variable_1="S2Interval" variable_2="S2Interval"/>
</connection>
</model>
