- Author:
- mtcooling <mtcooling.development@gmail.com>
- Date:
- 2015-08-24 10:57:56+12:00
- Desc:
- Split the annotation for the protocols into separate files in line with the metadata spec 2.0
- Permanent Source URI:
- https://models.physiomeproject.org/workspace/cooling_hunter_crampin_2009/rawfile/e4e4bc1366292fd3387f8391e774271f5a4e9c14/calcineurin_TomidaProtocol.cellml
<?xml version="1.0" encoding="iso-8859-1"?>
<model
name="calcineurin"
cmeta:id="calcineurin"
xmlns="http://www.cellml.org/cellml/1.1#"
xmlns:cellml="http://www.cellml.org/cellml/1.1#"
xmlns:cmeta="http://www.cellml.org/metadata/1.0#"
>
<!--
*******************************************************
*** U N I T S ***
*******************************************************
-->
<units name="s">
<unit units="second"/>
</units>
<units name="nM">
<unit units="mole" prefix="nano"/>
<unit units="liter" exponent="-1"/>
</units>
<!--
*********************************************************
*** C O M P O N E N T S ***
*********************************************************
-->
<component name="calcineurin">
<variable cmeta:id="v0" name="Ntot" units="nM" initial_value="1000" public_interface="out"/>
<variable cmeta:id="v1" name="M" units="nM" initial_value="6000"/>
<variable cmeta:id="v2" name="K_mN" units="nM" initial_value="535"/>
<variable cmeta:id="v3" name="n" units="dimensionless" initial_value="2.92"/>
<variable cmeta:id="v4" name="Ca" units="nM" public_interface="in"/>
<variable cmeta:id="v5" name="act_N" units="dimensionless" public_interface="out"/>
<variable cmeta:id="v6" name="K_dN" units="nM" initial_value="1760"/>
<variable cmeta:id="v7" name="t" units="s" public_interface="in"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<eq/>
<ci>act_N</ci>
<apply>
<divide/>
<apply>
<power/>
<ci>Ca</ci>
<ci>n</ci>
</apply>
<apply>
<plus/>
<apply>
<power/>
<ci>Ca</ci>
<ci>n</ci>
</apply>
<apply>
<times/>
<apply>
<power/>
<ci>K_mN</ci>
<ci>n</ci>
</apply>
<apply>
<plus/>
<cn cellml:units="dimensionless">1</cn>
<apply>
<divide/>
<ci>K_dN</ci>
<ci>M</ci>
</apply>
</apply>
</apply>
</apply>
</apply>
</apply>
</math>
</component>
</model>
