Location: NaB protein knowledge page @ 4e6b1f1fc08f / exposure / exposure_frontpage.rst

Author:
Shelley Fong <sfon036@UoA.auckland.ac.nz>
Date:
2024-09-13 14:19:49+12:00
Desc:
Init
Permanent Source URI:
https://models.physiomeproject.org/workspace/bd4/rawfile/4e6b1f1fc08f24db7f2163799e2cf43404a692bf/exposure/exposure_frontpage.rst

About
====================

Landing page for the proteins constituting the background sodium current (**NaB**).
   
This current was introduced by Luo and Rudy in order to make their model of the cardiomyocyte possess electroneutrality by ounterbalancing the extrusion of sodium from the NaK pump action. In reality, it appears to be made of currents from the (a) sodium leak channel - nonselective (NALCN), hyperpolarization-activated cation channels (h) and voltage-gated sodium (NaV) channels, found from studies of the neuron.

Other names for this current: **Na-leak**

Subfamilies
===================
The following list contains the known proteins which may form the **NaB** current.

.. csv-table:: Variants within the human species
   :header: "Name", "Alias", Gene, Structure
   :widths: 4,4, 7,7

   NALCN, VGCNL1, "`Uniprot NALCN <https://www.uniprot.org/uniprotkb/Q8IZF0/entry>`_", "`PDF NALCN <https://www.ebi.ac.uk/pdbe-srv/view/entry/6XIW>`_"
   h, HCN,  "`Uniprot h <https://www.uniprot.org/uniprotkb/O60741/entry>`_", "`PDF h <https://www.ebi.ac.uk/pdbe-srv/view/entry/5U6O>`_"

To date, information on the voltage gted sodium channel involved in creating this current were not found.


Literature
===================

.. csv-table:: For further reading
   :header: "Title", "Author"
   :widths: 30, 15   
   
   "`The neuronal channel NALCN contributes resting sodium permeability and is required for normal respiratory rhythm <https://doi.org/10.1016/j.cell.2007.02.041>`_", "Lu et al."

Existing models 
===================

.. csv-table:: Link to other PMR workspaces or exposures
   :header: "Title", "Author"
   :widths: 30, 15
   
   "`BG_Nab <https://models.physiomeproject.org/workspace/82b>`_", "S Fong" 
   "`A dynamic model of the cardiac ventricular action potential. I. Simulations of ionic currents and concentration changes*^ <https://models.physiomeproject.org/exposure/8f2ba36d47893780d4a1b41ae1b1a959>`_", "Luo and Rudy"

   
Models denoted by [*] are not in bond graph form.
Models denoted by [^] are part of a whole cell model.