Location: SLC transporters @ 9fd3365f60e3 / src / sim_GLUT2.py

Author:
Weiwei Ai <wai484@aucklanduni.ac.nz>
Date:
2024-05-08 11:00:57+12:00
Desc:
Add CellMLV2 for SGLT1; add fast binding data
Permanent Source URI:
https://models.physiomeproject.org/workspace/b65/rawfile/9fd3365f60e3e56a237516b1193b37f49ad44e2a/src/sim_GLUT2.py
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import sys
sys.path.append('../sedCellMLPy/')
from sedCollector import read_sedml
from sedExecutor import exec_sed_doc
from pathlib import Path

path_='../Facilitated transporter/CellMLV2/'
working_dir=Path(path_).absolute()
sedFiles=['GLUT2_kinetic','GLUT2_ss_io','GLUT2_ss_oi','GLUT2_BG_ss_oi','GLUT2_BG_ss_io']

for sedFile in sedFiles:
    full_path=path_+sedFile+'.sedml'
    doc=read_sedml(full_path)
    exec_sed_doc(doc, working_dir, working_dir, rel_out_path='sim_results', external_variables_info={},
                  external_variables_values=[],ss_time={},cost_type=None)