- Author:
- David Nickerson <david.nickerson@gmail.com>
- Date:
- 2024-01-29 23:19:10+13:00
- Desc:
- update from Peter
- Permanent Source URI:
- https://models.physiomeproject.org/workspace/b58/rawfile/2b37128464bd1e58ba66a90deec7ab078bf0fe82/README.rst
Bond graph example: Facilitated diffusion with SS flux and rapid binding and unbinding
======================================================================================
This example is designed to test the validity of the Hill-relation approximation to the biophysically based flux equation. The bond-graph model is illustrated in the figure below, with the CellML model defining the reduced model of steady-state flux assuming rapid binding and unbinding.
.. figure:: fig1.png
:width: 95%
:align: center
:alt: Schematic and bond graph of the model
The bond graph representation of facilitated diffusion.
The **Views Available** menu to the right provides various options to explore this model here in the Physiome Model Repository.
Of particular interest is the *Launch with OpenCOR* menu item, which will load the simulation experiment shown below directly into the `OpenCOR`_ desktop application.
.. figure:: fig2.png
:width: 95%
:align: center
:alt: OpenCOR showing simulation experiment.
Showing the result of launching the simulation experiment from this exposure in OpenCOR and executing the simulation.
.. _CellML: https://www.cellml.org/
.. _OpenCOR: https://opencor.ws/
.. _SED-ML: https://sed-ml.org
