Location: Standard Virtual Parts Template Models v200906 @ f58b52e92102 / Template_ProteinCDS.cellml

Author:

Mike Cooling <m.cooling@auckland.ac.nz>

Date:

2010-12-03 12:08:51+13:00

Desc:

Specified XML version 1.0, instead of 1.1 as was previously specified.

Permanent Source URI:

https://models.physiomeproject.org/workspace/SVP_Templates200906/rawfile/f58b52e92102c76072033cb6141b599b9c9d050b/Template_ProteinCDS.cellml

<?xml version="1.0" encoding="utf-8"?>

<model name="Template_ProteinCDS" cmeta:id="Template_ProteinCDS"
    xmlns="http://www.cellml.org/cellml/1.1#"
    xmlns:cellml="http://www.cellml.org/cellml/1.1#"
    xmlns:cmeta="http://www.cellml.org/metadata/1.0#"
    xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
    xmlns:dc="http://purl.org/dc/elements/1.0/"
    xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#"
    >
        
    <rdf:RDF>
            <rdf:Description rdf:about="#Template_ProteinCDS">
            <dc:creator>
            <vCard:N rdf:parseType="Resource">
                <vCard:Family>Cooling</vCard:Family>
                <vCard:Given>Mike</vCard:Given>
            </vCard:N>
            <vCard:EMAIL rdf:parseType="Resource">
                <rdf:value>m.cooling@auckland.ac.nz</rdf:value>
                <rdf:type rdf:resource="http://imc.org/vCard/3.0#internet"/>
            </vCard:EMAIL>
            <vCard:ORG rdf:parseType="Resource">
                <vCard:Orgname>Auckland Bioengineering Institute</vCard:Orgname>
                <vCard:Orgunit>University of Auckland</vCard:Orgunit>
            </vCard:ORG>
            </dc:creator>
            </rdf:Description>
   </rdf:RDF>
   
   <units name="per_s">
      <unit units="second" exponent="-1"/>
   </units>
   <units name="M">
      <unit units="mole"/>
      <unit units="liter" exponent="-1"/>
   </units> 
   <units name="nM">
      <unit units="M" prefix="nano"/>
   </units>
   <units name="RiPsInAttoMoles">
         <unit units="mole" prefix="atto"/>
         <unit units="second" exponent="-1"/>
   </units>
   <units name="femtoliter">
         <unit units="liter" prefix="femto"/>
   </units>
   <units name="nM_per_s">
	 <unit units="nM"/>
	 <unit units="per_s"/>
   </units>
   <units name="nanospermilli">
         <unit units="mole" prefix="nano"/>
         <unit units="mole" prefix="milli" exponent="-1"/>
   </units>
  
   <component name="Template_ProteinCDS">
      <variable name="localVolume" units="femtoliter" public_interface="in"/>
      <variable name="hostRNARiPs" units="RiPsInAttoMoles" public_interface="in"/>
      <variable name="J" units="nM_per_s" public_interface="out"/>
      <math xmlns="http://www.w3.org/1998/Math/MathML">
         <apply>
            <eq/>
            <ci>J</ci>
            <apply>
               <divide/>
               <apply>
                  <times/>
                  <cn type="e-notation" cellml:units="nanospermilli">1.0<sep/>6</cn>
                  <ci>hostRNARiPs</ci>
               </apply>
               <ci>localVolume</ci>
            </apply>
         </apply>
      </math>
   </component>
   
</model>