- Author:
- WeiweiAi <wai484@aucklanduni.ac.nz>
- Date:
- 2022-07-01 10:53:47+12:00
- Desc:
- First version of the model and original data
- Permanent Source URI:
- https://models.physiomeproject.org/workspace/8af/rawfile/20e3e451c78771d3f0cb8f5244f0ca68d84b4139/Components/O_S3.cellml
<?xml version='1.0' encoding='UTF-8'?>
<model name="O_S3" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:xlink="http://www.w3.org/1999/xlink">
<import xlink:href="../cellLib/Components/units.cellml">
<units name="ms" units_ref="ms"/>
<units name="per_ms" units_ref="per_ms"/>
</import>
<import xlink:href="../cellLib/Components/MarkovS.cellml">
<component component_ref="S3" name="S3"/>
</import>
<component name="O_S3">
<variable name="k_L" public_interface="in" units="per_ms"/>
<variable name="k_Lminus" public_interface="in" units="per_ms"/>
<variable name="k_C" public_interface="in" units="per_ms"/>
<variable name="k_Cminus" public_interface="in" units="per_ms"/>
<variable name="f" public_interface="in" units="dimensionless"/>
<variable name="k_i1" private_interface="out" public_interface="out" units="per_ms"/>
<variable name="k_i2" private_interface="out" public_interface="out" units="per_ms"/>
<variable name="k_i3" private_interface="out" public_interface="out" units="per_ms"/>
<variable name="k_1i" private_interface="out" public_interface="out" units="per_ms"/>
<variable name="k_2i" private_interface="out" public_interface="out" units="per_ms"/>
<variable name="k_3i" private_interface="out" public_interface="out" units="per_ms"/>
<variable name="norm" private_interface="out" public_interface="in" units="dimensionless"/>
<variable name="S_1" private_interface="out" public_interface="in" units="dimensionless"/>
<variable name="S_2" private_interface="out" public_interface="in" units="dimensionless"/>
<variable name="S_3" private_interface="out" public_interface="in" units="dimensionless"/>
<variable name="S_i" private_interface="in" public_interface="out" units="dimensionless"/>
<variable name="dS_i" private_interface="in" public_interface="out" units="per_ms"/>
<variable name="Si_init" private_interface="out" public_interface="in" units="dimensionless"/>
<variable name="N" public_interface="in" units="dimensionless"/>
<variable name="i" public_interface="in" units="dimensionless"/>
<variable name="t" private_interface="out" public_interface="in" units="ms"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<eq/>
<ci>k_i1</ci>
<apply>
<times/>
<ci>k_Cminus</ci>
<ci>i</ci>
<ci>f</ci>
</apply>
</apply>
<apply>
<eq/>
<ci>k_i2</ci>
<apply>
<times/>
<ci>k_Lminus</ci>
<apply>
<power/>
<ci>f</ci>
<ci>i</ci>
</apply>
</apply>
</apply>
<apply>
<eq/>
<ci>k_i3</ci>
<apply>
<divide/>
<apply>
<times/>
<apply>
<minus/>
<ci>N</ci>
<ci>i</ci>
</apply>
<ci>k_C</ci>
</apply>
<ci>f</ci>
</apply>
</apply>
<apply>
<eq/>
<ci>k_1i</ci>
<apply>
<divide/>
<apply>
<times/>
<apply>
<plus/>
<apply>
<minus/>
<ci>N</ci>
<ci>i</ci>
</apply>
<cn cellml:units="dimensionless">1</cn>
</apply>
<ci>k_C</ci>
</apply>
<ci>f</ci>
</apply>
</apply>
<apply>
<eq/>
<ci>k_2i</ci>
<apply>
<divide/>
<ci>k_L</ci>
<apply>
<power/>
<ci>f</ci>
<ci>i</ci>
</apply>
</apply>
</apply>
<apply>
<eq/>
<ci>k_3i</ci>
<apply>
<times/>
<apply>
<plus/>
<ci>i</ci>
<cn cellml:units="dimensionless">1</cn>
</apply>
<ci>k_Cminus</ci>
<ci>f</ci>
</apply>
</apply>
</math>
</component>
<group>
<relationship_ref relationship="encapsulation"/>
<component_ref component="O_S3">
<component_ref component="S3"/>
</component_ref>
</group>
<connection>
<map_components component_1="S3" component_2="O_S3"/>
<map_variables variable_1="S_i" variable_2="S_i"/>
<map_variables variable_1="dS_i" variable_2="dS_i"/>
<map_variables variable_1="t" variable_2="t"/>
<map_variables variable_1="Si_init" variable_2="Si_init"/>
<map_variables variable_1="k_i1" variable_2="k_i1"/>
<map_variables variable_1="k_i2" variable_2="k_i2"/>
<map_variables variable_1="k_i3" variable_2="k_i3"/>
<map_variables variable_1="k_1i" variable_2="k_1i"/>
<map_variables variable_1="k_2i" variable_2="k_2i"/>
<map_variables variable_1="k_3i" variable_2="k_3i"/>
<map_variables variable_1="norm" variable_2="norm"/>
<map_variables variable_1="S_1" variable_2="S_1"/>
<map_variables variable_1="S_2" variable_2="S_2"/>
<map_variables variable_1="S_3" variable_2="S_3"/>
</connection>
</model>
