Location: ECC_MSK (Rios et al. 1993) @ 113b9d7fbceb / Components / buildsrc / CN_S2.txt

Author:

WeiweiAi <wai484@aucklanduni.ac.nz>

Date:

2022-07-12 17:11:03+12:00

Desc:

Change the stimulation protocol to double pulse with conditioning; add steady state equations

Permanent Source URI:

https://models.physiomeproject.org/workspace/8af/rawfile/113b9d7fbcebee0427016d8f7d9b5b181656ab2e/Components/buildsrc/CN_S2.txt

def model CN_S2 as
    def import using "../cellLib/Components/units.cellml" for
        unit ms using unit ms;
        unit per_ms using unit per_ms;
    enddef;

    def import using "../cellLib/Components/MarkovS.cellml" for
        comp S2 using comp S2;
    enddef;

    def comp CN_S2 as
        var k_L: per_ms {pub: in};
        var k_Lminus: per_ms {pub: in};
        var k_C: per_ms {pub: in};
        var k_Cminus: per_ms {pub: in};
        var f: dimensionless {pub: in};
        var k_i1: per_ms {pub: out, priv: out};
        var k_i2: per_ms {pub: out, priv: out};
        var k_1i: per_ms {pub: out, priv: out};
        var k_2i: per_ms {pub: out, priv: out};
        var norm: dimensionless {pub: in, priv: out};
        var S_1: dimensionless {pub: in, priv: out};
        var S_2: dimensionless {pub: in, priv: out};
        var S_i: dimensionless {pub: out, priv: in};
        var dS_i: per_ms {pub: out, priv: in};
        var Si_init: dimensionless {pub: in, priv: out};
        var N: dimensionless {pub: in};
        var t: ms {pub: in, priv: out};

         k_i1 = k_Cminus*N;
         k_i2 = k_L/pow(f, N);
         k_1i = k_C;
         k_2i = k_Lminus*pow(f, N);

    enddef;

    def group as encapsulation for
        comp CN_S2 incl
            comp S2;
        endcomp;
    enddef;

    def map between S2 and CN_S2 for
        vars S_i and S_i;
        vars dS_i and dS_i;
        vars t and t;
        vars Si_init and Si_init;
        vars k_i1 and k_i1;
        vars k_i2 and k_i2;
        vars k_1i and k_1i;
        vars k_2i and k_2i;
        vars norm and norm;
        vars S_1 and S_1;
        vars S_2 and S_2;
    enddef;

enddef;