Location: 12 L Platform 1 model codes @ a8a92308e217 / USMC / E_Nernst.cellml

Author:
aram148 <42922407+aram148@users.noreply.github.com>
Date:
2022-07-22 15:47:05+12:00
Desc:
Added documentation for VSM model
Permanent Source URI:
https://models.physiomeproject.org/workspace/6b0/rawfile/a8a92308e217ac5626809237dd90a31240b22834/USMC/E_Nernst.cellml

<?xml version='1.0' encoding='UTF-8'?>
<model name="E_Nernst" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:xlink="http://www.w3.org/1999/xlink">
    <import xlink:href="units.cellml">
        <units name="J_per_K_mol" units_ref="J_per_K_mol"/>
        <units name="C_per_mmol" units_ref="C_per_mmol"/>
        <units name="mM" units_ref="mM"/>
        <units name="mV" units_ref="mV"/>
    </import>
    <import xlink:href="Nernst_potential.cellml">
        <component component_ref="Nernst_potential" name="E_NaComp"/>
    </import>
    <import xlink:href="Nernst_potential.cellml">
        <component component_ref="Nernst_potential" name="E_CaComp"/>
    </import>
    <import xlink:href="Nernst_potential.cellml">
        <component component_ref="Nernst_potential" name="E_KComp"/>
    </import>
    <component name="E_Na">
        <variable name="R" private_interface="out" public_interface="in" units="J_per_K_mol"/>
        <variable name="F" private_interface="out" public_interface="in" units="C_per_mmol"/>
        <variable name="T" private_interface="out" public_interface="in" units="kelvin"/>
        <variable initial_value="1" name="z_Na" private_interface="out" units="dimensionless"/>
        <variable name="Nai" private_interface="out" public_interface="in" units="mM"/>
        <variable name="Nao" private_interface="out" public_interface="in" units="mM"/>
        <variable name="E_Na" private_interface="in" public_interface="out" units="mV"/>
    </component>
    <component name="E_Ca">
        <variable name="R" private_interface="out" public_interface="in" units="J_per_K_mol"/>
        <variable name="F" private_interface="out" public_interface="in" units="C_per_mmol"/>
        <variable name="T" private_interface="out" public_interface="in" units="kelvin"/>
        <variable initial_value="2" name="z_Ca" private_interface="out" units="dimensionless"/>
        <variable name="Cai" private_interface="out" public_interface="in" units="mM"/>
        <variable name="Cao" private_interface="out" public_interface="in" units="mM"/>
        <variable name="E_Ca" private_interface="in" public_interface="out" units="mV"/>
    </component>
    <component name="E_K">
        <variable name="R" private_interface="out" public_interface="in" units="J_per_K_mol"/>
        <variable name="F" private_interface="out" public_interface="in" units="C_per_mmol"/>
        <variable name="T" private_interface="out" public_interface="in" units="kelvin"/>
        <variable initial_value="1" name="z_K" private_interface="out" units="dimensionless"/>
        <variable name="Ki" private_interface="out" public_interface="in" units="mM"/>
        <variable name="Ko" private_interface="out" public_interface="in" units="mM"/>
        <variable name="E_K" private_interface="in" public_interface="out" units="mV"/>
    </component>
    <group>
        <relationship_ref relationship="encapsulation"/>
        <component_ref component="E_Na">
            <component_ref component="E_NaComp"/>
        </component_ref>
        <component_ref component="E_K">
            <component_ref component="E_KComp"/>
        </component_ref>
        <component_ref component="E_Ca">
            <component_ref component="E_CaComp"/>
        </component_ref>
    </group>
    <connection>
        <map_components component_1="E_Na" component_2="E_NaComp"/>
        <map_variables variable_1="R" variable_2="R"/>
        <map_variables variable_1="F" variable_2="F"/>
        <map_variables variable_1="T" variable_2="T"/>
        <map_variables variable_1="z_Na" variable_2="z"/>
        <map_variables variable_1="Nai" variable_2="X_i"/>
        <map_variables variable_1="Nao" variable_2="X_o"/>
        <map_variables variable_1="E_Na" variable_2="E"/>
    </connection>
    <connection>
        <map_components component_1="E_Ca" component_2="E_CaComp"/>
        <map_variables variable_1="R" variable_2="R"/>
        <map_variables variable_1="F" variable_2="F"/>
        <map_variables variable_1="T" variable_2="T"/>
        <map_variables variable_1="z_Ca" variable_2="z"/>
        <map_variables variable_1="Cai" variable_2="X_i"/>
        <map_variables variable_1="Cao" variable_2="X_o"/>
        <map_variables variable_1="E_Ca" variable_2="E"/>
    </connection>
    <connection>
        <map_components component_1="E_K" component_2="E_KComp"/>
        <map_variables variable_1="R" variable_2="R"/>
        <map_variables variable_1="F" variable_2="F"/>
        <map_variables variable_1="T" variable_2="T"/>
        <map_variables variable_1="z_K" variable_2="z"/>
        <map_variables variable_1="Ki" variable_2="X_i"/>
        <map_variables variable_1="Ko" variable_2="X_o"/>
        <map_variables variable_1="E_K" variable_2="E"/>
    </connection>
</model>