Location: Generic mouse colon scaffold @ 3941cca419fa / mouseColon-settings.json

Author:
David Nickerson <david.nickerson@gmail.com>
Date:
2020-11-26 23:45:44+13:00
Desc:
update README to remove title as PMR will render the workspace title
Permanent Source URI:
https://models.physiomeproject.org/workspace/612/rawfile/3941cca419fa10dff6edd3df4d661a05e9f21edc/mouseColon-settings.json

{
    "generator_settings": {
        "deleteElementRanges": "",
        "displayAxes": true,
        "displayElementAxes": false,
        "displayElementNumbers": false,
        "displayLines": true,
        "displayLinesExterior": false,
        "displayMarkerPoints": false,
        "displayModelRadius": false,
        "displayNodeDerivativeLabels": [
            "D3"
        ],
        "displayNodeDerivatives": false,
        "displayNodeNumbers": false,
        "displayNodePoints": false,
        "displaySurfaces": true,
        "displaySurfacesExterior": true,
        "displaySurfacesTranslucent": false,
        "displaySurfacesWireframe": false,
        "scaffoldPackage": {
            "_ScaffoldPackage": true,
            "rotation": [
                0.0,
                0.0,
                0.0
            ],
            "scaffoldSettings": {
                "Central path": {
                    "_ScaffoldPackage": true,
                    "meshEdits": "EX Version: 2\n Group name: meshEdits\n!#nodeset nodes\nShape. Dimension=0\n#Fields=1\n1) coordinates, coordinate, rectangular cartesian, real, #Components=3\n x. #Values=4 (value,d/ds1,d/ds2,d2/ds1ds2)\n y. #Values=4 (value,d/ds1,d/ds2,d2/ds1ds2)\n z. #Values=4 (value,d/ds1,d/ds2,d2/ds1ds2)\nNode: 1\n  0.000000000000000e+00  6.000000000000000e+00  2.000000000000000e+00  6.000000000000000e+00\n  0.000000000000000e+00  1.200000000000000e+01  1.000000000000000e+00  0.000000000000000e+00\n  0.000000000000000e+00 -2.000000000000000e+00  2.000000000000000e+00  3.000000000000000e+00\nNode: 2\n -2.000000000000000e+00 -8.000000000000000e+00  2.000000000000000e+00  0.000000000000000e+00\n  1.100000000000000e+01  4.000000000000000e+00  2.000000000000000e+00  1.000000000000000e+00\n -3.000000000000000e+00  9.000000000000000e+00  1.000000000000000e+00  2.000000000000000e+00\nNode: 3\n -3.000000000000000e+00 -4.000000000000000e+00  2.000000000000000e+00  1.000000000000000e+00\n  2.000000000000000e+00 -8.000000000000000e+00 -1.000000000000000e+00  0.000000000000000e+00\n  3.000000000000000e+00  0.000000000000000e+00  2.000000000000000e+00  2.000000000000000e+00\nNode: 4\n -1.100000000000000e+01 -8.000000000000000e+00  1.000000000000000e+00  0.000000000000000e+00\n -3.000000000000000e+00 -3.000000000000000e+00 -2.000000000000000e+00  0.000000000000000e+00\n -4.000000000000000e+00 -7.000000000000000e+00  1.000000000000000e+00  5.000000000000000e-01\nNode: 5\n -1.600000000000000e+01  4.000000000000000e+00  1.000000000000000e+00  0.000000000000000e+00\n -4.000000000000000e+00 -3.000000000000000e+00 -3.000000000000000e+00  0.000000000000000e+00\n  0.000000000000000e+00  1.400000000000000e+01  0.000000000000000e+00  5.000000000000000e-01\nNode: 6\n -7.000000000000000e+00  5.000000000000000e+00  0.000000000000000e+00  0.000000000000000e+00\n -8.000000000000000e+00 -1.000000000000000e+00 -3.000000000000000e+00  0.000000000000000e+00\n  0.000000000000000e+00 -1.400000000000000e+01  0.000000000000000e+00  5.000000000000000e-01\nNode: 7\n -1.000000000000000e+00  2.000000000000000e+00  1.000000000000000e+00  0.000000000000000e+00\n -6.000000000000000e+00 -2.000000000000000e+00 -3.000000000000000e+00  0.000000000000000e+00\n -1.000000000000000e+00  9.000000000000000e+00 -1.000000000000000e+00  5.000000000000000e-01\nNode: 8\n -2.000000000000000e+00 -2.000000000000000e+00  1.000000000000000e+00  0.000000000000000e+00\n -1.400000000000000e+01 -4.000000000000000e+00 -2.000000000000000e+00  0.000000000000000e+00\n  5.000000000000000e+00  2.000000000000000e+00 -2.000000000000000e+00  5.000000000000000e-01\n",
                    "rotation": [
                        0.0,
                        0.0,
                        0.0
                    ],
                    "scaffoldSettings": {
                        "Coordinate dimensions": 3,
                        "D2 derivatives": true,
                        "D3 derivatives": false,
                        "Length": 1.0,
                        "Number of elements": 7
                    },
                    "scaffoldTypeName": "1D Path 1",
                    "scale": [
                        1.0,
                        1.0,
                        1.0
                    ],
                    "translation": [
                        0.0,
                        0.0,
                        0.0
                    ]
                },
                "Distal inner radius": 0.7,
                "Distal length": 25.0,
                "Distal tenia coli width": 1.0,
                "Number of segments": 10,
                "Proximal inner radius": 1.0,
                "Proximal length": 30.0,
                "Proximal tenia coli width": 0.5,
                "Proximal-transverse inner radius": 0.9,
                "Proximal-transverse tenia coli width": 0.7,
                "Refine": false,
                "Refine number of elements along": 1,
                "Refine number of elements around": 1,
                "Refine number of elements through wall": 1,
                "Segment profile": {
                    "_ScaffoldPackage": true,
                    "rotation": [
                        0.0,
                        0.0,
                        0.0
                    ],
                    "scaffoldSettings": {
                        "Corner inner radius factor": 0.0,
                        "End inner radius": 0.94,
                        "End inner radius derivative": 0.0,
                        "End tenia coli width": 0.8,
                        "End tenia coli width derivative": 0.0,
                        "Haustrum inner radius factor": 0.0,
                        "Number of elements along segment": 4,
                        "Number of elements around haustrum": 8,
                        "Number of elements around tenia coli": 2,
                        "Number of elements through wall": 1,
                        "Number of tenia coli": 1,
                        "Refine": false,
                        "Refine number of elements along segment": 1,
                        "Refine number of elements around": 1,
                        "Refine number of elements through wall": 1,
                        "Segment length": 50.0,
                        "Segment length end derivative factor": 0.0,
                        "Segment length mid derivative factor": 0.0,
                        "Start inner radius": 0.94,
                        "Start inner radius derivative": 0.0,
                        "Start phase": 0.0,
                        "Start tenia coli width": 0.8,
                        "Start tenia coli width derivative": 0.0,
                        "Tenia coli thickness": 0.0,
                        "Use cross derivatives": false,
                        "Use linear through wall": true,
                        "Wall thickness": 0.55
                    },
                    "scaffoldTypeName": "3D Colon Segment 1",
                    "scale": [
                        1.0,
                        1.0,
                        1.0
                    ],
                    "translation": [
                        0.0,
                        0.0,
                        0.0
                    ]
                },
                "Start phase": 0.0,
                "Transverse length": 20.0,
                "Transverse-distal inner radius": 0.7,
                "Transverse-distal tenia coli width": 1.0
            },
            "scaffoldTypeName": "3D Colon 1",
            "scale": [
                1.0,
                1.0,
                1.0
            ],
            "translation": [
                0.0,
                0.0,
                0.0
            ]
        }
    },
    "segmentation_data_settings": {
        "displayDataContours": true,
        "displayDataMarkerNames": true,
        "displayDataMarkerPoints": true,
        "displayDataPoints": false,
        "displayDataRadius": false
    }
}