Location: Na+/Glucose Transporter @ 962bccba5110 / BGjun.cellml

Author:
Soroush Safaei <ssaf006@aucklanduni.ac.nz>
Date:
2016-11-08 18:27:54+13:00
Desc:
Initial commit for BondGraph SGLT
Permanent Source URI:
https://models.physiomeproject.org/workspace/436/rawfile/962bccba5110b6ff849f76226d66e00b152defa8/BGjun.cellml

<?xml version='1.0'?>
<!-- BGjun.cellml generated on Mon Jul 18 14:10:40 AEST 2016 by makeJunctions 6-->
<model name="BGjun" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#">
    <!-- 0-junctions-->
    <component name="J0_2">
        <!-- Port 1-->
        <variable name="e_1" public_interface="in" units="effort"/>
        <variable name="f_1" public_interface="out" units="flow"/>
        <variable name="h_1" public_interface="in" units="dimensionless"/>
        <!-- Port 2-->
        <variable name="e_2" public_interface="out" units="effort"/>
        <variable name="f_2" public_interface="in" units="flow"/>
        <variable name="h_2" public_interface="in" units="dimensionless"/>
        <!-- All e variables are the same-->
        <math xmlns="http://www.w3.org/1998/Math/MathML">
            <apply>
                <eq/>
                <ci>e_2</ci>
                <ci>e_1</ci>
            </apply>
            <!-- All f variables sum to zero-->
            <apply>
                <eq/>
                <ci>f_1</ci>
                <apply>
                    <times/>
                    <apply>
                        <minus/>
                        <ci>h_1</ci>
                    </apply>
                    <apply>
                        <times/>
                        <ci>h_2</ci>
                        <ci>f_2</ci>
                    </apply>
                </apply>
            </apply>
        </math>
    </component>
    <component name="J0_3">
        <!-- Port 1-->
        <variable name="e_1" public_interface="in" units="effort"/>
        <variable name="f_1" public_interface="out" units="flow"/>
        <variable name="h_1" public_interface="in" units="dimensionless"/>
        <!-- Port 2-->
        <variable name="e_2" public_interface="out" units="effort"/>
        <variable name="f_2" public_interface="in" units="flow"/>
        <variable name="h_2" public_interface="in" units="dimensionless"/>
        <!-- Port 3-->
        <variable name="e_3" public_interface="out" units="effort"/>
        <variable name="f_3" public_interface="in" units="flow"/>
        <variable name="h_3" public_interface="in" units="dimensionless"/>
        <!-- All e variables are the same-->
        <math xmlns="http://www.w3.org/1998/Math/MathML">
            <apply>
                <eq/>
                <ci>e_2</ci>
                <ci>e_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>e_3</ci>
                <ci>e_1</ci>
            </apply>
            <!-- All f variables sum to zero-->
            <apply>
                <eq/>
                <ci>f_1</ci>
                <apply>
                    <times/>
                    <apply>
                        <minus/>
                        <ci>h_1</ci>
                    </apply>
                    <apply>
                        <plus/>
                        <apply>
                            <times/>
                            <ci>h_2</ci>
                            <ci>f_2</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_3</ci>
                            <ci>f_3</ci>
                        </apply>
                    </apply>
                </apply>
            </apply>
        </math>
    </component>
    <component name="J0_4">
        <!-- Port 1-->
        <variable name="e_1" public_interface="in" units="effort"/>
        <variable name="f_1" public_interface="out" units="flow"/>
        <variable name="h_1" public_interface="in" units="dimensionless"/>
        <!-- Port 2-->
        <variable name="e_2" public_interface="out" units="effort"/>
        <variable name="f_2" public_interface="in" units="flow"/>
        <variable name="h_2" public_interface="in" units="dimensionless"/>
        <!-- Port 3-->
        <variable name="e_3" public_interface="out" units="effort"/>
        <variable name="f_3" public_interface="in" units="flow"/>
        <variable name="h_3" public_interface="in" units="dimensionless"/>
        <!-- Port 4-->
        <variable name="e_4" public_interface="out" units="effort"/>
        <variable name="f_4" public_interface="in" units="flow"/>
        <variable name="h_4" public_interface="in" units="dimensionless"/>
        <!-- All e variables are the same-->
        <math xmlns="http://www.w3.org/1998/Math/MathML">
            <apply>
                <eq/>
                <ci>e_2</ci>
                <ci>e_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>e_3</ci>
                <ci>e_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>e_4</ci>
                <ci>e_1</ci>
            </apply>
            <!-- All f variables sum to zero-->
            <apply>
                <eq/>
                <ci>f_1</ci>
                <apply>
                    <times/>
                    <apply>
                        <minus/>
                        <ci>h_1</ci>
                    </apply>
                    <apply>
                        <plus/>
                        <apply>
                            <times/>
                            <ci>h_2</ci>
                            <ci>f_2</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_3</ci>
                            <ci>f_3</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_4</ci>
                            <ci>f_4</ci>
                        </apply>
                    </apply>
                </apply>
            </apply>
        </math>
    </component>
    <component name="J0_5">
        <!-- Port 1-->
        <variable name="e_1" public_interface="in" units="effort"/>
        <variable name="f_1" public_interface="out" units="flow"/>
        <variable name="h_1" public_interface="in" units="dimensionless"/>
        <!-- Port 2-->
        <variable name="e_2" public_interface="out" units="effort"/>
        <variable name="f_2" public_interface="in" units="flow"/>
        <variable name="h_2" public_interface="in" units="dimensionless"/>
        <!-- Port 3-->
        <variable name="e_3" public_interface="out" units="effort"/>
        <variable name="f_3" public_interface="in" units="flow"/>
        <variable name="h_3" public_interface="in" units="dimensionless"/>
        <!-- Port 4-->
        <variable name="e_4" public_interface="out" units="effort"/>
        <variable name="f_4" public_interface="in" units="flow"/>
        <variable name="h_4" public_interface="in" units="dimensionless"/>
        <!-- Port 5-->
        <variable name="e_5" public_interface="out" units="effort"/>
        <variable name="f_5" public_interface="in" units="flow"/>
        <variable name="h_5" public_interface="in" units="dimensionless"/>
        <!-- All e variables are the same-->
        <math xmlns="http://www.w3.org/1998/Math/MathML">
            <apply>
                <eq/>
                <ci>e_2</ci>
                <ci>e_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>e_3</ci>
                <ci>e_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>e_4</ci>
                <ci>e_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>e_5</ci>
                <ci>e_1</ci>
            </apply>
            <!-- All f variables sum to zero-->
            <apply>
                <eq/>
                <ci>f_1</ci>
                <apply>
                    <times/>
                    <apply>
                        <minus/>
                        <ci>h_1</ci>
                    </apply>
                    <apply>
                        <plus/>
                        <apply>
                            <times/>
                            <ci>h_2</ci>
                            <ci>f_2</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_3</ci>
                            <ci>f_3</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_4</ci>
                            <ci>f_4</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_5</ci>
                            <ci>f_5</ci>
                        </apply>
                    </apply>
                </apply>
            </apply>
        </math>
    </component>
    <component name="J0_6">
        <!-- Port 1-->
        <variable name="e_1" public_interface="in" units="effort"/>
        <variable name="f_1" public_interface="out" units="flow"/>
        <variable name="h_1" public_interface="in" units="dimensionless"/>
        <!-- Port 2-->
        <variable name="e_2" public_interface="out" units="effort"/>
        <variable name="f_2" public_interface="in" units="flow"/>
        <variable name="h_2" public_interface="in" units="dimensionless"/>
        <!-- Port 3-->
        <variable name="e_3" public_interface="out" units="effort"/>
        <variable name="f_3" public_interface="in" units="flow"/>
        <variable name="h_3" public_interface="in" units="dimensionless"/>
        <!-- Port 4-->
        <variable name="e_4" public_interface="out" units="effort"/>
        <variable name="f_4" public_interface="in" units="flow"/>
        <variable name="h_4" public_interface="in" units="dimensionless"/>
        <!-- Port 5-->
        <variable name="e_5" public_interface="out" units="effort"/>
        <variable name="f_5" public_interface="in" units="flow"/>
        <variable name="h_5" public_interface="in" units="dimensionless"/>
        <!-- Port 6-->
        <variable name="e_6" public_interface="out" units="effort"/>
        <variable name="f_6" public_interface="in" units="flow"/>
        <variable name="h_6" public_interface="in" units="dimensionless"/>
        <!-- All e variables are the same-->
        <math xmlns="http://www.w3.org/1998/Math/MathML">
            <apply>
                <eq/>
                <ci>e_2</ci>
                <ci>e_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>e_3</ci>
                <ci>e_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>e_4</ci>
                <ci>e_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>e_5</ci>
                <ci>e_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>e_6</ci>
                <ci>e_1</ci>
            </apply>
            <!-- All f variables sum to zero-->
            <apply>
                <eq/>
                <ci>f_1</ci>
                <apply>
                    <times/>
                    <apply>
                        <minus/>
                        <ci>h_1</ci>
                    </apply>
                    <apply>
                        <plus/>
                        <apply>
                            <times/>
                            <ci>h_2</ci>
                            <ci>f_2</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_3</ci>
                            <ci>f_3</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_4</ci>
                            <ci>f_4</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_5</ci>
                            <ci>f_5</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_6</ci>
                            <ci>f_6</ci>
                        </apply>
                    </apply>
                </apply>
            </apply>
        </math>
    </component>
    <!-- 1-junctions-->
    <component name="J1_2">
        <!-- Port 1-->
        <variable name="e_1" public_interface="out" units="effort"/>
        <variable name="f_1" public_interface="in" units="flow"/>
        <variable name="h_1" public_interface="in" units="dimensionless"/>
        <!-- Port 2-->
        <variable name="e_2" public_interface="in" units="effort"/>
        <variable name="f_2" public_interface="out" units="flow"/>
        <variable name="h_2" public_interface="in" units="dimensionless"/>
        <!-- All f variables are the same-->
        <math xmlns="http://www.w3.org/1998/Math/MathML">
            <apply>
                <eq/>
                <ci>f_2</ci>
                <ci>f_1</ci>
            </apply>
            <!-- All e variables sum to zero-->
            <apply>
                <eq/>
                <ci>e_1</ci>
                <apply>
                    <times/>
                    <apply>
                        <minus/>
                        <ci>h_1</ci>
                    </apply>
                    <apply>
                        <times/>
                        <ci>h_2</ci>
                        <ci>e_2</ci>
                    </apply>
                </apply>
            </apply>
        </math>
    </component>
    <component name="J1_3">
        <!-- Port 1-->
        <variable name="e_1" public_interface="out" units="effort"/>
        <variable name="f_1" public_interface="in" units="flow"/>
        <variable name="h_1" public_interface="in" units="dimensionless"/>
        <!-- Port 2-->
        <variable name="e_2" public_interface="in" units="effort"/>
        <variable name="f_2" public_interface="out" units="flow"/>
        <variable name="h_2" public_interface="in" units="dimensionless"/>
        <!-- Port 3-->
        <variable name="e_3" public_interface="in" units="effort"/>
        <variable name="f_3" public_interface="out" units="flow"/>
        <variable name="h_3" public_interface="in" units="dimensionless"/>
        <!-- All f variables are the same-->
        <math xmlns="http://www.w3.org/1998/Math/MathML">
            <apply>
                <eq/>
                <ci>f_2</ci>
                <ci>f_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>f_3</ci>
                <ci>f_1</ci>
            </apply>
            <!-- All e variables sum to zero-->
            <apply>
                <eq/>
                <ci>e_1</ci>
                <apply>
                    <times/>
                    <apply>
                        <minus/>
                        <ci>h_1</ci>
                    </apply>
                    <apply>
                        <plus/>
                        <apply>
                            <times/>
                            <ci>h_2</ci>
                            <ci>e_2</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_3</ci>
                            <ci>e_3</ci>
                        </apply>
                    </apply>
                </apply>
            </apply>
        </math>
    </component>
    <component name="J1_4">
        <!-- Port 1-->
        <variable name="e_1" public_interface="out" units="effort"/>
        <variable name="f_1" public_interface="in" units="flow"/>
        <variable name="h_1" public_interface="in" units="dimensionless"/>
        <!-- Port 2-->
        <variable name="e_2" public_interface="in" units="effort"/>
        <variable name="f_2" public_interface="out" units="flow"/>
        <variable name="h_2" public_interface="in" units="dimensionless"/>
        <!-- Port 3-->
        <variable name="e_3" public_interface="in" units="effort"/>
        <variable name="f_3" public_interface="out" units="flow"/>
        <variable name="h_3" public_interface="in" units="dimensionless"/>
        <!-- Port 4-->
        <variable name="e_4" public_interface="in" units="effort"/>
        <variable name="f_4" public_interface="out" units="flow"/>
        <variable name="h_4" public_interface="in" units="dimensionless"/>
        <!-- All f variables are the same-->
        <math xmlns="http://www.w3.org/1998/Math/MathML">
            <apply>
                <eq/>
                <ci>f_2</ci>
                <ci>f_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>f_3</ci>
                <ci>f_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>f_4</ci>
                <ci>f_1</ci>
            </apply>
            <!-- All e variables sum to zero-->
            <apply>
                <eq/>
                <ci>e_1</ci>
                <apply>
                    <times/>
                    <apply>
                        <minus/>
                        <ci>h_1</ci>
                    </apply>
                    <apply>
                        <plus/>
                        <apply>
                            <times/>
                            <ci>h_2</ci>
                            <ci>e_2</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_3</ci>
                            <ci>e_3</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_4</ci>
                            <ci>e_4</ci>
                        </apply>
                    </apply>
                </apply>
            </apply>
        </math>
    </component>
    <component name="J1_5">
        <!-- Port 1-->
        <variable name="e_1" public_interface="out" units="effort"/>
        <variable name="f_1" public_interface="in" units="flow"/>
        <variable name="h_1" public_interface="in" units="dimensionless"/>
        <!-- Port 2-->
        <variable name="e_2" public_interface="in" units="effort"/>
        <variable name="f_2" public_interface="out" units="flow"/>
        <variable name="h_2" public_interface="in" units="dimensionless"/>
        <!-- Port 3-->
        <variable name="e_3" public_interface="in" units="effort"/>
        <variable name="f_3" public_interface="out" units="flow"/>
        <variable name="h_3" public_interface="in" units="dimensionless"/>
        <!-- Port 4-->
        <variable name="e_4" public_interface="in" units="effort"/>
        <variable name="f_4" public_interface="out" units="flow"/>
        <variable name="h_4" public_interface="in" units="dimensionless"/>
        <!-- Port 5-->
        <variable name="e_5" public_interface="in" units="effort"/>
        <variable name="f_5" public_interface="out" units="flow"/>
        <variable name="h_5" public_interface="in" units="dimensionless"/>
        <!-- All f variables are the same-->
        <math xmlns="http://www.w3.org/1998/Math/MathML">
            <apply>
                <eq/>
                <ci>f_2</ci>
                <ci>f_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>f_3</ci>
                <ci>f_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>f_4</ci>
                <ci>f_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>f_5</ci>
                <ci>f_1</ci>
            </apply>
            <!-- All e variables sum to zero-->
            <apply>
                <eq/>
                <ci>e_1</ci>
                <apply>
                    <times/>
                    <apply>
                        <minus/>
                        <ci>h_1</ci>
                    </apply>
                    <apply>
                        <plus/>
                        <apply>
                            <times/>
                            <ci>h_2</ci>
                            <ci>e_2</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_3</ci>
                            <ci>e_3</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_4</ci>
                            <ci>e_4</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_5</ci>
                            <ci>e_5</ci>
                        </apply>
                    </apply>
                </apply>
            </apply>
        </math>
    </component>
    <component name="J1_6">
        <!-- Port 1-->
        <variable name="e_1" public_interface="out" units="effort"/>
        <variable name="f_1" public_interface="in" units="flow"/>
        <variable name="h_1" public_interface="in" units="dimensionless"/>
        <!-- Port 2-->
        <variable name="e_2" public_interface="in" units="effort"/>
        <variable name="f_2" public_interface="out" units="flow"/>
        <variable name="h_2" public_interface="in" units="dimensionless"/>
        <!-- Port 3-->
        <variable name="e_3" public_interface="in" units="effort"/>
        <variable name="f_3" public_interface="out" units="flow"/>
        <variable name="h_3" public_interface="in" units="dimensionless"/>
        <!-- Port 4-->
        <variable name="e_4" public_interface="in" units="effort"/>
        <variable name="f_4" public_interface="out" units="flow"/>
        <variable name="h_4" public_interface="in" units="dimensionless"/>
        <!-- Port 5-->
        <variable name="e_5" public_interface="in" units="effort"/>
        <variable name="f_5" public_interface="out" units="flow"/>
        <variable name="h_5" public_interface="in" units="dimensionless"/>
        <!-- Port 6-->
        <variable name="e_6" public_interface="in" units="effort"/>
        <variable name="f_6" public_interface="out" units="flow"/>
        <variable name="h_6" public_interface="in" units="dimensionless"/>
        <!-- All f variables are the same-->
        <math xmlns="http://www.w3.org/1998/Math/MathML">
            <apply>
                <eq/>
                <ci>f_2</ci>
                <ci>f_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>f_3</ci>
                <ci>f_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>f_4</ci>
                <ci>f_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>f_5</ci>
                <ci>f_1</ci>
            </apply>
            <apply>
                <eq/>
                <ci>f_6</ci>
                <ci>f_1</ci>
            </apply>
            <!-- All e variables sum to zero-->
            <apply>
                <eq/>
                <ci>e_1</ci>
                <apply>
                    <times/>
                    <apply>
                        <minus/>
                        <ci>h_1</ci>
                    </apply>
                    <apply>
                        <plus/>
                        <apply>
                            <times/>
                            <ci>h_2</ci>
                            <ci>e_2</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_3</ci>
                            <ci>e_3</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_4</ci>
                            <ci>e_4</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_5</ci>
                            <ci>e_5</ci>
                        </apply>
                        <apply>
                            <times/>
                            <ci>h_6</ci>
                            <ci>e_6</ci>
                        </apply>
                    </apply>
                </apply>
            </apply>
        </math>
    </component>
</model>