Location: Signalling Principled Model Example @ ad404d66f734 / ShearStress_to_IP3_Parameters.cellml

Author:
Michael Cooling <mcoo001@UoA.auckland.ac.nz>
Date:
2016-04-11 12:30:41+12:00
Desc:
Adding .zip of complete model
Permanent Source URI:
https://models.physiomeproject.org/workspace/2c4/rawfile/ad404d66f734c5e175dca6c4601b7a2f00d8a1a3/ShearStress_to_IP3_Parameters.cellml
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<?xml version="1.0" encoding="utf-8"?>

<model name="ShearStress_to_IP3_Parameters" cmeta:id="ShearStress_to_IP3_Parameters"
    xmlns="http://www.cellml.org/cellml/1.1#"
    xmlns:cellml="http://www.cellml.org/cellml/1.1#"
    xmlns:cmeta="http://www.cellml.org/metadata/1.0#"
    xmlns:xlink="http://www.w3.org/1999/xlink"
    >
    
    <import xmlns="http://www.cellml.org/cellml/1.1#" xlink:href="Principled_Base/Units_Cellular_Systems.cellml">
		<units name="N_per_m2" units_ref="N_per_m2"/>
		<units name="m2_per_N" units_ref="m2_per_N"/>
		<units name="per_s" units_ref="per_s"/>
		<units name="uM" units_ref="uM"/>
    </import>
    
   <component name="ShearStress_to_IP3_Parameters">
	<variable name="tau_c" units="N_per_m2" initial_value="0.008"  public_interface="out"/>
	<variable name="Rtau_phi_max" units="dimensionless" initial_value="1" public_interface="out"/>
	<variable name="Rtau_phi_init" units="dimensionless" initial_value="0" public_interface="out"/>
	<variable name="beta_phi" units="m2_per_N" initial_value="10" public_interface="out"/>
        <variable name="Rtau_init" units="dimensionless" initial_value="0"  public_interface="out"/>
	<variable name="Rtau_k1" units="per_s" initial_value="0.115"  public_interface="out"/>
	<variable name="Rtau_k2" units="per_s" initial_value="0.05"  public_interface="out"/>
	<variable name="IP3_k1_init" units="dimensionless" initial_value="0"  public_interface="out"/>
	<variable name="IP3_k1_max" units="dimensionless" initial_value="1.65"  public_interface="out"/>
	<variable name="beta_IP3_k1" units="m2_per_N" initial_value="100"  public_interface="out"/>

	<variable name="IP3_k2_init" units="per_s" initial_value="0.00025" public_interface="out"/>
	<variable name="IP3_k2_max" units="per_s" initial_value="0.0504" public_interface="out"/>
	<variable name="beta_IP3_k2" units="m2_per_N" initial_value="10.475" public_interface="out"/>

	<variable name="IP3_f_k1" units="per_s" initial_value="0.0175" public_interface="out"/>
	<variable name="IP3_f_k2" units="per_s" initial_value="0.00075" public_interface="out"/>
	<variable name="IP3_f_Km" units="uM" initial_value="0.15" public_interface="out"/>
	<variable name="IP3_f_init" units="dimensionless" initial_value="0" public_interface="out" />
	<variable name="IP3_init" units="dimensionless" initial_value="0"  public_interface="out"/>
	<variable name="J_IP3_External" units="per_s" initial_value="0"  public_interface="out"/>
   </component>
   
</model>