Location: Signalling Principled Model Example @ ad404d66f734 / Calcium_Handling_Parameters.cellml

Author:
Michael Cooling <mcoo001@UoA.auckland.ac.nz>
Date:
2016-04-11 12:30:41+12:00
Desc:
Adding .zip of complete model
Permanent Source URI:
https://models.physiomeproject.org/workspace/2c4/rawfile/ad404d66f734c5e175dca6c4601b7a2f00d8a1a3/Calcium_Handling_Parameters.cellml

<?xml version="1.0" encoding="utf-8"?>

<model name="Calcium_Handling_Parameters" cmeta:id="Calcium_Handling_Parameters"
    xmlns="http://www.cellml.org/cellml/1.1#"
    xmlns:cellml="http://www.cellml.org/cellml/1.1#"
    xmlns:cmeta="http://www.cellml.org/metadata/1.0#"
    xmlns:xlink="http://www.w3.org/1999/xlink"
    >
    
    <import xmlns="http://www.cellml.org/cellml/1.1#" xlink:href="Principled_Base/Units_Cellular_Systems.cellml">
		<units name="N_per_m2" units_ref="N_per_m2"/>
		<units name="m2_per_N" units_ref="m2_per_N"/>
		<units name="per_s" units_ref="per_s"/>
		<units name="uM" units_ref="uM"/>
		<units name="uM_per_s" units_ref="uM_per_s"/>
		<units name="per_uM_per_s" units_ref="per_uM_per_s"/>
		<units name="N_m_per_K" units_ref="N_m_per_K"/>
		<units name="per_m2" units_ref="per_m2"/>
		<units name="N_per_m" units_ref="N_per_m"/>
    </import>
    
   <component name="Calcium_Handling_Parameters">
	<variable name="Ca_if_init" units="uM" initial_value="0.1" public_interface="out"/>
	<variable name="Ca_st_init" units="uM" initial_value="2828" public_interface="out"/>
	<variable name="Ca_st_rest" units="uM" initial_value="2828" public_interface="out"/>
	<variable name="Ca_if_rest" units="uM" initial_value="0.00244096" public_interface="out"/>
	<variable name="qout_basal_vmax" units="uM_per_s" initial_value="0.6043" public_interface="out" />
	<variable name="qout_basal_Km" units="uM" initial_value="0.08" public_interface="out" />
	<variable name="qout_basal_n" units="dimensionless" initial_value="1.7" public_interface="out" />
	<variable name="qout_pump_vmax" units="uM_per_s" initial_value="31.67" public_interface="out" />
	<variable name="qout_pump_Km" units="uM" initial_value="0.38" public_interface="out" />
	<variable name="qout_pump_n" units="dimensionless" initial_value="4.4" public_interface="out" />
	<variable name="qout_exch_vmax" units="uM_per_s" initial_value="18.33" public_interface="out" />
	<variable name="qout_exch_Km" units="uM" initial_value="1" public_interface="out" />
	<variable name="qout_exch_n" units="dimensionless" initial_value="1" public_interface="out" />
	<variable name="qrel_k2" units="per_s" initial_value="6.64" public_interface="out" />
	<variable name="qrel_k1" units="uM" initial_value="0.2" public_interface="out" />
	<variable name="qres_k1" units="uM_per_s" initial_value="5" public_interface="out" />
	<variable name="qres_k2" units="uM" initial_value="0.15" public_interface="out" />
	<variable name="qres_k3" units="per_uM_per_s" initial_value="1e-7" public_interface="out" />
	<variable name="qin_kcce" units="per_uM_per_s" initial_value="8e-7" public_interface="out" />
	<variable name="qin_max" units="uM_per_s" initial_value="17.6" public_interface="out" />
	<variable name="qin_alpha" units="dimensionless" initial_value="2" public_interface="out" />
	<variable name="qinw_f" units="dimensionless" initial_value="0.0134" public_interface="out" />
	<variable name="epsilon" units="dimensionless" initial_value="0.1" public_interface="out" />
	<variable name="k" units="N_m_per_K" initial_value="1.3807e-23" public_interface="out" />     
	<variable name="cac" units="per_m2" initial_value="1e12" public_interface="out" />
	<variable name="qinw_delta" units="N_per_m" initial_value="1e-5" public_interface="out" />  
	<variable name="J_Ca_st_External" units="uM_per_s" initial_value="0" public_interface="out"/>
	<variable name="J_Ca_if_External" units="uM_per_s" initial_value="0" public_interface="out"/>
   </component>
   
</model>