- Author:
- Soroush Safaei <ssaf006@aucklanduni.ac.nz>
- Date:
- 2016-08-06 20:08:55+12:00
- Desc:
- adding sedml file
- Permanent Source URI:
- https://models.physiomeproject.org/workspace/2b8/rawfile/ee51359b7a3c13c613774931716d791b51789813/Diffusion_test.cellml
<?xml version='1.0'?>
<model cmeta:id="Diffusion" name="Diffusion" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:cmeta="http://www.cellml.org/metadata/1.0#" xmlns:xlink="http://www.w3.org/1999/xlink">
<import xlink:href="Units/Units.cellml">
<units name="mM" units_ref="mM"/>
<units name="mM_per_s" units_ref="mM_per_s"/>
<units name="cm_per_s" units_ref="cm_per_s"/>
<units name="umol_per_s_per_cm2" units_ref="umol_per_s_per_cm2"/>
</import>
<import xlink:href="Diffusion.cellml">
<component component_ref="Diffusion" name="Diffusion"/>
</import>
<component name="environment">
<variable name="time" public_interface="out" units="second"/>
</component>
<component name="concentrations">
<variable name="time" public_interface="in" units="second"/>
<variable initial_value="1.0" name="Na_int" public_interface="out" units="mM"/>
<variable initial_value="100.0" name="Na_ext" public_interface="out" units="mM"/>
<variable initial_value="0.3" name="D_Na" public_interface="out" units="cm_per_s"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>time</ci>
</bvar>
<ci>Na_int</ci>
</apply>
<cn cellml:units="mM_per_s">1.0</cn>
</apply>
</math>
</component>
<component name="fluxes">
<variable name="J_diff_Na" public_interface="in" units="umol_per_s_per_cm2"/>
</component>
<connection>
<map_components component_1="concentrations" component_2="Diffusion"/>
<map_variables variable_1="Na_int" variable_2="C_int"/>
<map_variables variable_1="Na_ext" variable_2="C_ext"/>
<map_variables variable_1="D_Na" variable_2="D"/>
</connection>
<connection>
<map_components component_1="fluxes" component_2="Diffusion"/>
<map_variables variable_1="J_diff_Na" variable_2="J_diff"/>
</connection>
<connection>
<map_components component_1="concentrations" component_2="environment"/>
<map_variables variable_1="time" variable_2="time"/>
</connection>
</model>
