- Author:
- Soroush Safaei <ssaf006@aucklanduni.ac.nz>
- Date:
- 2017-03-07 10:24:32+13:00
- Desc:
- Merge branch 'master' of https://models.physiomeproject.org/workspace/297
- Permanent Source URI:
- https://models.physiomeproject.org/workspace/297/rawfile/1ee70a82ea535aad13fdd50d1058b8a42043419f/BG/IF.cellml
<?xml version='1.0'?>
<model name="Acid_BG" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:xlink="http://www.w3.org/1999/xlink">
<import xlink:href="Units.cellml">
<units name="mol_per_m3" units_ref="mol_per_m3"/>
<units name="mol_per_m3_s" units_ref="mol_per_m3_s"/>
<units name="per_m" units_ref="per_m"/>
<units name="per_s" units_ref="per_s"/>
<units name="m_per_s" units_ref="m_per_s"/>
<units name="m3_per_mol" units_ref="m3_per_mol"/>
<units name="J_per_mol_K" units_ref="J_per_mol_K"/>
<units name="J_per_C" units_ref="J_per_C"/>
<units name="C_per_mol" units_ref="C_per_mol"/>
</import>
<component name="AcidBase">
<variable initial_value="0" name="q_CO2_o" public_interface="out" units="mol_per_m3"/>
<variable initial_value="0" name="q_CO2_i" public_interface="out" units="mol_per_m3"/>
<variable initial_value="1" name="q_HCO3_o" public_interface="out" units="mol_per_m3"/>
<variable initial_value="0" name="q_HCO3_i" public_interface="out" units="mol_per_m3"/>
<variable initial_value="1" name="q_H_o" public_interface="out" units="mol_per_m3"/>
<variable initial_value="0" name="q_H_i" public_interface="out" units="mol_per_m3"/>
<variable initial_value="0" name="q_Na_o" public_interface="out" units="mol_per_m3"/>
<variable initial_value="0" name="q_Na_i" public_interface="out" units="mol_per_m3"/>
<variable name="v_Re_1" units="mol_per_m3_s"/>
<variable name="v_Re_2" units="mol_per_m3_s"/>
<variable name="v_Re_3" units="mol_per_m3_s"/>
<variable name="v_Re_4" units="mol_per_m3_s"/>
<variable initial_value="0.00000926" name="K_CO2_o" public_interface="out" units="mol_per_m3"/>
<variable initial_value="0.00000926" name="K_CO2_i" public_interface="out" units="mol_per_m3"/>
<variable initial_value="0.108" name="K_HCO3_i" public_interface="out" units="mol_per_m3"/>
<variable initial_value="0.108" name="K_HCO3_o" public_interface="out" units="mol_per_m3"/>
<variable initial_value="0.108" name="K_H_i" public_interface="out" units="mol_per_m3"/>
<variable initial_value="0.108" name="K_H_o" public_interface="out" units="mol_per_m3"/>
<variable initial_value="1" name="K_Na_i" public_interface="out" units="mol_per_m3"/>
<variable initial_value="1" name="K_Na_o" public_interface="out" units="mol_per_m3"/>
<variable initial_value="4050" name="K_Re_1" public_interface="out" units="mol_per_m3"/>
<variable initial_value="4050" name="K_Re_2" public_interface="out" units="mol_per_m3"/>
<variable initial_value="6e-5" name="K_Re_3" public_interface="out" units="mol_per_m3"/>
<variable initial_value="1" name="K_Re_4" public_interface="out" units="mol_per_m3"/>
<variable name="pH_o" units="dimensionless"/>
<variable name="pH_i" units="dimensionless"/>
<variable name="t" public_interface="out" units="second"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>t</ci>
</bvar>
<ci>q_HCO3_o</ci>
</apply>
<apply>
<minus/>
<ci>v_Re_1</ci>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>t</ci>
</bvar>
<ci>q_HCO3_i</ci>
</apply>
<ci>v_Re_2</ci>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>t</ci>
</bvar>
<ci>q_H_o</ci>
</apply>
<apply>
<plus/>
<apply>
<minus/>
<ci>v_Re_1</ci>
</apply>
<ci>v_Re_4</ci>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>t</ci>
</bvar>
<ci>q_H_i</ci>
</apply>
<apply>
<minus/>
<ci>v_Re_2</ci>
<ci>v_Re_4</ci>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>t</ci>
</bvar>
<ci>q_CO2_o</ci>
</apply>
<apply>
<minus/>
<ci>v_Re_1</ci>
<ci>v_Re_3</ci>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>t</ci>
</bvar>
<ci>q_CO2_i</ci>
</apply>
<apply>
<minus/>
<ci>v_Re_3</ci>
<ci>v_Re_2</ci>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>t</ci>
</bvar>
<ci>q_Na_o</ci>
</apply>
<apply>
<minus/>
<ci>v_Re_4</ci>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>t</ci>
</bvar>
<ci>q_Na_i</ci>
</apply>
<ci>v_Re_4</ci>
</apply>
<apply>
<eq/>
<ci>v_Re_1</ci>
<apply>
<times/>
<ci>K_Re_1</ci>
<apply>
<minus/>
<apply>
<times/>
<ci>K_HCO3_o</ci>
<ci>K_H_o</ci>
<ci>q_HCO3_o</ci>
<ci>q_H_o</ci>
</apply>
<apply>
<times/>
<ci>K_CO2_o</ci>
<ci>q_CO2_o</ci>
</apply>
</apply>
</apply>
</apply>
<apply>
<eq/>
<ci>v_Re_2</ci>
<apply>
<times/>
<ci>K_Re_2</ci>
<apply>
<minus/>
<apply>
<times/>
<ci>K_CO2_i</ci>
<ci>q_CO2_i</ci>
</apply>
<apply>
<times/>
<ci>K_HCO3_i</ci>
<ci>K_H_i</ci>
<ci>q_HCO3_i</ci>
<ci>q_H_i</ci>
</apply>
</apply>
</apply>
</apply>
<apply>
<eq/>
<ci>v_Re_3</ci>
<apply>
<times/>
<ci>K_Re_3</ci>
<apply>
<minus/>
<apply>
<times/>
<ci>K_CO2_o</ci>
<ci>q_CO2_o</ci>
</apply>
<apply>
<times/>
<ci>K_CO2_i</ci>
<ci>q_CO2_i</ci>
</apply>
</apply>
</apply>
</apply>
<apply>
<eq/>
<ci>v_Re_4</ci>
<apply>
<times/>
<ci>K_Re_4</ci>
<apply>
<minus/>
<apply>
<times/>
<ci>K_H_i</ci>
<ci>q_H_i</ci>
</apply>
<apply>
<times/>
<ci>K_H_o</ci>
<ci>q_H_o</ci>
</apply>
</apply>
</apply>
</apply>
<apply>
<eq/>
<ci>pH_o</ci>
<apply>
<minus/>
<apply>
<log/>
<apply>
<times/>
<cn cellml:units="dimensionless" type="e-notation">1<sep/>-3</cn>
<ci>q_H_o</ci>
</apply>
</apply>
</apply>
</apply>
<apply>
<eq/>
<ci>pH_i</ci>
<apply>
<minus/>
<apply>
<log/>
<apply>
<times/>
<cn cellml:units="dimensionless" type="e-notation">1<sep/>-3</cn>
<ci>q_H_i</ci>
</apply>
</apply>
</apply>
</apply>
</math>
</component>
</model>