Location: Anion Exchanger @ bfe3af8b5a3e / Weinstein_2000_AE1_Fig2D.cellml

Author:
Soroush Safaei <ssaf006@aucklanduni.ac.nz>
Date:
2016-04-13 17:09:57+12:00
Desc:
add protein module tag
Permanent Source URI:
https://models.physiomeproject.org/workspace/290/rawfile/bfe3af8b5a3e6c13b0091449d23b8bd04c5c645e/Weinstein_2000_AE1_Fig2D.cellml
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<?xml version='1.0'?>
<model cmeta:id="Weinstein_2000_AE1" name="Weinstein_2000_AE1" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:cmeta="http://www.cellml.org/metadata/1.0#" xmlns:xlink="http://www.w3.org/1999/xlink">
    <import xlink:href="Units/Units.cellml">
        <units name="mM" units_ref="mM"/>
        <units name="per_s" units_ref="per_s"/>
        <units name="mM_per_s" units_ref="mM_per_s"/>
    </import>
    <import xlink:href="Weinstein_2000_AE1.cellml">
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    </import>
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    </component>
    <component name="concentrations">
        <variable name="time" public_interface="in" units="second"/>
        <variable initial_value="1.0" name="HCO3_int" public_interface="out" units="mM"/>
        <variable initial_value="50.0" name="HCO3_ext" public_interface="out" units="mM"/>
        <variable initial_value="0.0" name="Cl_int" public_interface="out" units="mM"/>
        <variable initial_value="0.0" name="Cl_ext" public_interface="out" units="mM"/>
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                    <diff/>
                    <bvar>
                        <ci>time</ci>
                    </bvar>
                    <ci>HCO3_int</ci>
                </apply>
                <cn cellml:units="mM_per_s">1.0</cn>
            </apply>
            <apply>
                <eq/>
                <apply>
                    <diff/>
                    <bvar>
                        <ci>time</ci>
                    </bvar>
                    <ci>HCO3_ext</ci>
                </apply>
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            </apply>
            <apply>
                <eq/>
                <apply>
                    <diff/>
                    <bvar>
                        <ci>time</ci>
                    </bvar>
                    <ci>Cl_int</ci>
                </apply>
                <cn cellml:units="mM_per_s">0.0</cn>
            </apply>
            <apply>
                <eq/>
                <apply>
                    <diff/>
                    <bvar>
                        <ci>time</ci>
                    </bvar>
                    <ci>Cl_ext</ci>
                </apply>
                <cn cellml:units="mM_per_s">0.0</cn>
            </apply>
        </math>
    </component>
    <component name="fluxes">
        <variable name="J_AE1_HCO3" public_interface="in" units="mM_per_s"/>
        <variable name="J_AE1_Cl" public_interface="in" units="mM_per_s"/>
        <variable name="J_HCO3_influx" public_interface="in" units="mM_per_s"/>
        <variable name="J_Cl_influx" public_interface="in" units="mM_per_s"/>
    </component>
    <connection>
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        <map_variables variable_1="HCO3_int" variable_2="HCO3_int"/>
        <map_variables variable_1="HCO3_ext" variable_2="HCO3_ext"/>
        <map_variables variable_1="Cl_int" variable_2="Cl_int"/>
        <map_variables variable_1="Cl_ext" variable_2="Cl_ext"/>
    </connection>
    <connection>
        <map_components component_1="fluxes" component_2="AE1"/>
        <map_variables variable_1="J_AE1_HCO3" variable_2="J_AE1_HCO3"/>
        <map_variables variable_1="J_AE1_Cl" variable_2="J_AE1_Cl"/>
        <map_variables variable_1="J_HCO3_influx" variable_2="J_HCO3_influx"/>
        <map_variables variable_1="J_Cl_influx" variable_2="J_Cl_influx"/>
    </connection>
    <connection>
        <map_components component_1="concentrations" component_2="environment"/>
        <map_variables variable_1="time" variable_2="time"/>
    </connection>
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            <!-- A human readable name for the model. -->
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        The Weinstein 2000 quantitative model of AE1 (Cl/HCO3 exchanger).&#xd;
      </dc:title>
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          This is the CellML description of the Weinstein 2000 quantitative model of AE1 (Cl/HCO3 exchanger)&#xd;
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                            <rdf:li xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">renal</rdf:li>
                            <rdf:li xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">ion transport</rdf:li>
                            <rdf:li xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">kidney</rdf:li>
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                                        <vCard:Family xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">Weinstein</vCard:Family>
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                                        <vCard:Other xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">M</vCard:Other>
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                    <dc:title xmlns:dc="http://purl.org/dc/elements/1.1/">&#xd;
           A mathematical model of the outer medullary collecting duct of the rat&#xd;
          </dc:title>
                    <dcterms:issued xmlns:dcterms="http://purl.org/dc/terms/" rdf:parseType="Resource" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
                        <dcterms:W3CDTF xmlns:dcterms="http://purl.org/dc/terms/">2000-07</dcterms:W3CDTF>
                    </dcterms:issued>
                    <bqs:Journal xmlns:bqs="http://www.cellml.org/bqs/1.0#" rdf:parseType="Resource" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
                        <dc:title xmlns:dc="http://purl.org/dc/elements/1.1/">American Journal of Physiology</dc:title>
                    </bqs:Journal>
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                    <bqs:first_page xmlns:bqs="http://www.cellml.org/bqs/1.0#">24</bqs:first_page>
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</model>