Location: Anion Exchanger @ 4ef16f8d2089 / documentation-fig2a.html

Author:

Soroush Safaei <ssaf006@aucklanduni.ac.nz>

Date:

2016-11-29 18:34:58+13:00

Desc:

adding N matrix

Permanent Source URI:

https://models.physiomeproject.org/workspace/290/rawfile/4ef16f8d2089083dd313b22d6f3aa0e0c7d013ca/documentation-fig2a.html

Figure 2A

This is the general mathematical model for the AE1 model with modifications to enable simulations which are capable of reproducing Figure 2A in the original paper. See the various views available in the right hand column. The simulation experiment for this model can be obtained by loading the corresponding SED-ML document into OpenCOR and executing the simulation. The results of which are shown below. A rendering of the mathematical model itself is available here.

In Figure 2A, the HCO₃^- influx is computed for a range of external HCO₃^- when ambient Cl^- is not present. Internal HCO₃^- concentration is fixed at 50 mM.

A screenshot illustrating the results when the associated SED-ML document is loaded into OpenCOR and the simulation executed.

This can be reproduced directly from the repository by choosing the Launch with OpenCOR link from the Views Available.