- Author:
- David Nickerson <nickerso@users.sourceforge.net>
- Date:
- 2015-02-16 16:45:16+13:00
- Desc:
- adding a second dummy uniprot annotation for testing; now using the located_in property from the OBO Relationship Ontology to annotate a components cellular location (idea from Mikes document) rather than abusing the encapsulation grouping in the CellML model
- Permanent Source URI:
- https://models.physiomeproject.org/workspace/19f/rawfile/b6ee456100c3f0e68d9c59d4935f9a62f1b55f9a/solute-rate-equation/model.xml
<?xml version="1.0"?>
<model xmlns="http://www.cellml.org/cellml/1.1#" name="model"
xmlns:cellml="http://www.cellml.org/cellml/1.1#"
xmlns:cmeta="http://www.cellml.org/metadata/2.0#" cmeta:id="model"
xmlns:xlink="http://www.w3.org/1999/xlink">
<import xlink:href="../units/units-map.xml">
<units name="concentration" units_ref="concentration" />
<units name="soluteFlux" units_ref="soluteFlux" />
<units name="time" units_ref="time"/>
</import>
<component name="interface" cmeta:id="component">
<variable name="initialValue" cmeta:id="initialValue" units="concentration" public_interface="in" private_interface="out"/><variable name="concentration" cmeta:id="concentration" units="concentration" public_interface="out" private_interface="out" initial_value="initialValue"/>
<variable name="rateOfChange" cmeta:id="rateOfChange" units="soluteFlux" public_interface="in" private_interface="out"/>
<variable name="time" cmeta:id="time" units="time" public_interface="in" private_interface="out"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply><eq/>
<apply><diff/>
<bvar><ci>time</ci></bvar>
<ci>concentration</ci>
</apply>
<ci>rateOfChange</ci>
</apply>
</math>
</component>
</model>