- Author:
- Ting Yu <ting.yu@auckland.ac.nz>
- Date:
- 2014-05-05 11:11:02+12:00
- Desc:
- Change the unit from dimensionless to TODO.
- Permanent Source URI:
- https://models.physiomeproject.org/workspace/194/rawfile/c560868b736d95fd544954a4a3d5875175c194dc/cellml/Kidney1.cellml
<?xml version="1.0"?>
<model xmlns="http://www.cellml.org/cellml/1.1#" name="Kidney1">
<component name="Kidney1">
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply id="1">
<eq/>
<ci>CPRX
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.2
</cn>
</apply>
<apply id="2">
<eq/>
<ci>YNH0
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.024
</cn>
</apply>
<apply id="3">
<eq/>
<ci>YTA0
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.0068
</cn>
</apply>
<apply id="4">
<eq/>
<ci>YNH4
</ci>
<apply>
<times/>
<ci>YNH0
</ci>
<apply>
<plus/>
<apply>
<times/>
<apply>
<minus/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.5
</cn>
</apply>
<ci>PHU1
</ci>
</apply>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">4
</cn>
</apply>
</apply>
</apply>
<apply id="5">
<eq/>
<ci>F62
</ci>
<apply>
<times/>
<ci>YTA0
</ci>
<apply>
<plus/>
<apply>
<times/>
<apply>
<minus/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">2.5
</cn>
</apply>
<ci>PHA1
</ci>
</apply>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">19.5
</cn>
</apply>
</apply>
</apply>
<apply id="6">
<eq/>
<ci>YTA1
</ci>
<piecewise>
<piece>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0
</cn>
<apply>
<leq/>
<ci>PHU2
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">4
</cn>
</apply>
</piece>
<piece>
<apply>
<times/>
<ci>F62
</ci>
<apply>
<minus/>
<ci>PHU2
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">4
</cn>
</apply>
</apply>
<apply>
<and/>
<apply>
<gt/>
<ci>PHU2
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">4
</cn>
</apply>
<apply>
<leq/>
<ci>PHU2
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">5
</cn>
</apply>
</apply>
</piece>
<otherwise>
<ci>F62
</ci>
</otherwise>
</piecewise>
</apply>
<apply id="7">
<eq/>
<apply>
<diff/>
<bvar>
<ci>t
</ci>
</bvar>
<ci>PHU2
</ci>
</apply>
<apply>
<divide/>
<apply>
<minus/>
<ci>PHU
</ci>
<ci>PHU2
</ci>
</apply>
<ci>TRSP
</ci>
</apply>
</apply>
<apply id="8">
<eq/>
<ci>STPO
</ci>
<apply>
<times/>
<ci>YPO4
</ci>
<apply>
<plus/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">1
</cn>
<apply>
<divide/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">1
</cn>
<apply>
<plus/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">1
</cn>
<apply>
<power/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">10
</cn>
<apply>
<minus/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">6.8
</cn>
<ci>PHA
</ci>
</apply>
</apply>
</apply>
</apply>
</apply>
</apply>
</apply>
<apply id="9">
<eq/>
<ci>CORG
</ci>
<apply>
<divide/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">1
</cn>
<apply>
<plus/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">1
</cn>
<apply>
<power/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">10
</cn>
<apply>
<minus/>
<ci>PHA
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">4.3
</cn>
</apply>
</apply>
</apply>
</apply>
</apply>
<apply id="16">
<eq/>
<ci>STPG
</ci>
<apply>
<max/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0
</cn>
<apply>
<minus/>
<apply>
<plus/>
<ci>STPO
</ci>
<ci>YORG
</ci>
</apply>
<ci>YTA
</ci>
</apply>
</apply>
</apply>
<apply id="17">
<eq/>
<ci>YTA
</ci>
<apply>
<plus/>
<ci>YTA1
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.009
</cn>
<apply>
<times/>
<ci>ALD
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.001
</cn>
</apply>
</apply>
</apply>
<apply id="18">
<eq/>
<apply>
<diff/>
<bvar>
<ci>t
</ci>
</bvar>
<ci>PHA1
</ci>
</apply>
<apply>
<divide/>
<apply>
<minus/>
<ci>PHA
</ci>
<ci>PHA1
</ci>
</apply>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">200
</cn>
</apply>
</apply>
<apply id="19">
<eq/>
<apply>
<diff/>
<bvar>
<ci>t
</ci>
</bvar>
<ci>PHU1
</ci>
</apply>
<apply>
<divide/>
<apply>
<minus/>
<ci>PHU
</ci>
<ci>PHU1
</ci>
</apply>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">300
</cn>
</apply>
</apply>
<apply id="20">
<eq/>
<ci>YNOD
</ci>
<apply>
<max/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0
</cn>
<apply>
<minus/>
<apply>
<plus/>
<ci>YTA1
</ci>
<ci>YNH4
</ci>
</apply>
<ci>YCO3
</ci>
</apply>
</apply>
</apply>
<apply id="21">
<eq/>
<ci>YNU
</ci>
<apply>
<max/>
<apply>
<minus/>
<apply>
<times/>
<ci>YND
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.116
</cn>
</apply>
<ci>YNOD
</ci>
</apply>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0
</cn>
</apply>
</apply>
<apply id="22">
<eq/>
<ci>GFR1_6
</ci>
<apply>
<times/>
<ci>THDF
</ci>
<ci>GFR
</ci>
<ci>CPRX
</ci>
</apply>
</apply>
<apply id="23">
<eq/>
<ci>YND
</ci>
<apply>
<minus/>
<apply>
<times/>
<ci>XNE
</ci>
<ci>GFR1_6
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.5
</cn>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.9
</cn>
</apply>
<apply>
<times/>
<ci>ALD
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.09
</cn>
</apply>
</apply>
</apply>
<apply id="24">
<eq/>
<ci>YKU
</ci>
<apply>
<times/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.39
</cn>
<ci>YKD
</ci>
</apply>
</apply>
<apply id="25">
<eq/>
<ci>YKD
</ci>
<apply>
<plus/>
<apply>
<times/>
<ci>ALD
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.018
</cn>
<ci>XKE
</ci>
</apply>
<apply>
<times/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.9
</cn>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.5
</cn>
<ci>GFR1_6
</ci>
<ci>XKE
</ci>
</apply>
</apply>
</apply>
<apply id="26">
<eq/>
<ci>OSMU
</ci>
<apply>
<divide/>
<apply>
<plus/>
<ci>YGLU
</ci>
<ci>YURU
</ci>
<ci>YMNU
</ci>
<apply>
<times/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">1.86
</cn>
<apply>
<plus/>
<ci>YKU
</ci>
<ci>YNU
</ci>
</apply>
</apply>
</apply>
<ci>QWU
</ci>
</apply>
</apply>
<apply id="27">
<eq/>
<ci>QWD
</ci>
<apply>
<divide/>
<apply>
<plus/>
<ci>YGLU
</ci>
<ci>YURU
</ci>
<ci>YMNU
</ci>
<apply>
<times/>
<apply>
<plus/>
<ci>YND
</ci>
<ci>YKD
</ci>
</apply>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">1.86
</cn>
</apply>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.32
</cn>
</apply>
<ci>OSMP
</ci>
</apply>
</apply>
<apply id="28">
<eq/>
<ci>QWU
</ci>
<apply>
<minus/>
<ci>QWD
</ci>
<apply>
<times/>
<ci>QWD
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.9
</cn>
<ci>ADH
</ci>
</apply>
</apply>
</apply>
<apply id="29">
<eq/>
<ci>YNH
</ci>
<apply>
<times/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.5
</cn>
<ci>GFR1_6
</ci>
<ci>XNE
</ci>
</apply>
</apply>
<apply id="10">
<eq/>
<ci>A
</ci>
<apply>
<minus/>
<apply>
<minus/>
<ci>STPG
</ci>
<ci>YPO4
</ci>
</apply>
<apply>
<times/>
<ci>CORG
</ci>
<ci>YORG
</ci>
</apply>
</apply>
</apply>
<apply id="11">
<eq/>
<ci>B
</ci>
<apply>
<minus/>
<apply>
<minus/>
<apply>
<times/>
<apply>
<plus/>
<apply>
<power/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">10
</cn>
<apply>
<minus/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">4.3
</cn>
</apply>
</apply>
<apply>
<power/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">10
</cn>
<apply>
<minus/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">6.8
</cn>
</apply>
</apply>
</apply>
<ci>A
</ci>
</apply>
<apply>
<times/>
<apply>
<power/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">10
</cn>
<apply>
<minus/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">6.8
</cn>
</apply>
</apply>
<ci>YPO4
</ci>
</apply>
</apply>
<apply>
<times/>
<apply>
<power/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">10
</cn>
<apply>
<minus/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">4.3
</cn>
</apply>
</apply>
<ci>YORG
</ci>
</apply>
</apply>
</apply>
<apply id="12">
<eq/>
<ci>C
</ci>
<apply>
<times/>
<apply>
<power/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">10
</cn>
<apply>
<minus/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">4.3
</cn>
</apply>
</apply>
<apply>
<power/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">10
</cn>
<apply>
<minus/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">6.8
</cn>
</apply>
</apply>
<apply>
<minus/>
<apply>
<minus/>
<ci>A
</ci>
<ci>YPO4
</ci>
</apply>
<ci>YORG
</ci>
</apply>
</apply>
</apply>
<apply id="13">
<eq/>
<ci>D
</ci>
<apply>
<minus/>
<apply>
<power/>
<ci>B
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">2
</cn>
</apply>
<apply>
<times/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">4
</cn>
<ci>A
</ci>
<ci>C
</ci>
</apply>
</apply>
</apply>
<apply id="14">
<eq/>
<ci>HU
</ci>
<apply>
<divide/>
<apply>
<times/>
<apply>
<plus/>
<apply>
<minus/>
<ci>B
</ci>
</apply>
<apply>
<power/>
<ci>D
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.5
</cn>
</apply>
</apply>
<ci>A
</ci>
</apply>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">2
</cn>
</apply>
</apply>
<apply id="15">
<eq/>
<ci>PHU
</ci>
<apply>
<minus/>
<apply>
<log/>
<ci>HU
</ci>
</apply>
</apply>
</apply>
</math>
<variable name="CPRX" units="TODO"/>
<variable name="YNH0" units="TODO"/>
<variable name="YTA0" units="TODO"/>
<variable name="YNH4" public_interface="out" units="TODO"/>
<variable name="F62" units="TODO"/>
<variable name="YTA1" units="TODO"/>
<variable initial_value="6" name="PHU2" units="TODO"/>
<variable name="t" public_interface="in" units="TODO"/>
<variable name="PHU" units="TODO"/>
<variable name="TRSP" public_interface="in" units="TODO"/>
<variable name="STPO" units="TODO"/>
<variable name="YPO4" public_interface="in" units="TODO"/>
<variable name="STPG" public_interface="out" units="TODO"/>
<variable name="YTA" units="TODO"/>
<variable initial_value="7.4" name="PHA1" units="TODO"/>
<variable name="PHA" public_interface="in" units="TODO"/>
<variable initial_value="6" name="PHU1" units="TODO"/>
<variable name="YNOD" units="TODO"/>
<variable name="YNU" public_interface="out" units="TODO"/>
<variable name="YND" units="TODO"/>
<variable name="GFR1_6" units="TODO"/>
<variable name="THDF" public_interface="in" units="TODO"/>
<variable name="GFR" public_interface="in" units="TODO"/>
<variable name="XNE" public_interface="in" units="TODO"/>
<variable name="YKU" public_interface="out" units="TODO"/>
<variable name="YKD" units="TODO"/>
<variable name="ALD" public_interface="in" units="TODO"/>
<variable name="OSMU" units="TODO"/>
<variable name="YGLU" public_interface="in" units="TODO"/>
<variable name="YURU" public_interface="in" units="TODO"/>
<variable name="YMNU" public_interface="in" units="TODO"/>
<variable name="QWD" units="TODO"/>
<variable name="QWU" public_interface="out" units="TODO"/>
<variable name="YNH" public_interface="out" units="TODO"/>
<variable name="YORG" public_interface="in" units="TODO"/>
<variable name="YCO3" public_interface="in" units="TODO"/>
<variable name="XKE" public_interface="in" units="TODO"/>
<variable name="OSMP" public_interface="in" units="TODO"/>
<variable name="ADH" public_interface="in" units="TODO"/>
<variable name="A" units="TODO"/>
<variable name="CORG" units="TODO"/>
<variable name="B" units="TODO"/>
<variable name="C" units="TODO"/>
<variable name="D" units="TODO"/>
<variable name="HU" units="TODO"/>
</component>
<component name="InputsDummies6">
<variable name="ADH" public_interface="out" units="TODO"/>
<variable name="ALD" public_interface="out" units="TODO"/>
<variable name="GFR" public_interface="out" units="TODO"/>
<variable name="OSMP" public_interface="out" units="TODO"/>
<variable name="PHA" public_interface="out" units="TODO"/>
<variable name="THDF" public_interface="out" units="TODO"/>
<variable name="XKE" public_interface="out" units="TODO"/>
<variable name="XNE" public_interface="out" units="TODO"/>
<variable name="YCO3" public_interface="out" units="TODO"/>
<variable name="YGLU" public_interface="out" units="TODO"/>
<variable name="YORG" public_interface="out" units="TODO"/>
<variable name="YPO4" public_interface="out" units="TODO"/>
<variable name="YMNU" public_interface="out" units="TODO"/>
<variable name="YURU" public_interface="out" units="TODO"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply id="30">
<eq/>
<ci>ADH
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.999992264
</cn>
</apply>
<apply id="31">
<eq/>
<ci>ALD
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">1.000202138
</cn>
</apply>
<apply id="32">
<eq/>
<ci>GFR
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.1
</cn>
</apply>
<apply id="33">
<eq/>
<ci>OSMP
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">9.73
</cn>
</apply>
<apply id="34">
<eq/>
<ci>PHA
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0
</cn>
</apply>
<apply id="35">
<eq/>
<ci>THDF
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">1
</cn>
</apply>
<apply id="30">
<eq/>
<ci>XKE
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">24.75
</cn>
</apply>
<apply id="37">
<eq/>
<ci>XNE
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">770
</cn>
</apply>
<apply id="38">
<eq/>
<ci>YCO3
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0
</cn>
</apply>
<apply id="33">
<eq/>
<ci>YGLU
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">2
</cn>
</apply>
<apply id="40">
<eq/>
<ci>YORG
</ci>
<apply>
<minus/>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">1
</cn>
</apply>
</apply>
<apply id="41">
<eq/>
<ci>YPO4
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">3
</cn>
</apply>
<apply id="42">
<eq/>
<ci>YMNU
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0
</cn>
</apply>
<apply id="43">
<eq/>
<ci>YURU
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">0.211363636
</cn>
</apply>
<apply id="44">
<eq/>
<ci>TRSP
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="TODO">1
</cn>
</apply>
</math>
<variable name="TRSP" public_interface="out" units="TODO"/>
<variable initial_value="0" name="t" public_interface="out" units="TODO"/>
</component>
<connection>
<map_components component_1="Kidney1" component_2="InputsDummies6"/>
<map_variables variable_1="ADH" variable_2="ADH"/>
<map_variables variable_1="ALD" variable_2="ALD"/>
<map_variables variable_1="GFR" variable_2="GFR"/>
<map_variables variable_1="OSMP" variable_2="OSMP"/>
<map_variables variable_1="PHA" variable_2="PHA"/>
<map_variables variable_1="THDF" variable_2="THDF"/>
<map_variables variable_1="XKE" variable_2="XKE"/>
<map_variables variable_1="XNE" variable_2="XNE"/>
<map_variables variable_1="YCO3" variable_2="YCO3"/>
<map_variables variable_1="YGLU" variable_2="YGLU"/>
<map_variables variable_1="YORG" variable_2="YORG"/>
<map_variables variable_1="YPO4" variable_2="YPO4"/>
<map_variables variable_1="YMNU" variable_2="YMNU"/>
<map_variables variable_1="YURU" variable_2="YURU"/>
<map_variables variable_1="TRSP" variable_2="TRSP"/>
<map_variables variable_1="t" variable_2="t"/>
</connection>
<units name="TODO">
<unit units="dimensionless"/>
</units>
</model>
