Model Mathematics

Component: environment

Component: main

R_off=R_T-D+A_1+A_2 ddtimeD=k_onR_off+f_primeA_1+gA_2-k_off+fD ddtimeA_1=fD+h_primeA_2-f_prime+hA_1 ddtimeA_2=hA_1-h_prime+gA_2 lambda_off=R_offR_T lambda_on=D+A_1+A_2R_T lambda_D=DR_T lambda_A_1=A_1R_T lambda_A_2=A_2R_T lambda_A2_cyc=A_2D+A_1+A_2 Ca=Ca_50100 Ca_50=k_Ca_offk_Ca_on F=11+CaCa_50-n_H

Component: RU_rate_constant

k_u_on=k_0_on+k_Ca_on-k_0_onCaCa_50+Ca k_u_off=k_0_off+k_Ca_off-k_0_offCaCa_50+Ca

Component: RU_RU_interaction

k_w_on=k_u_on1+lambda_onu-12 k_w_off=k_u_offu-lambda_onu-12

Component: XB_XB_interaction

f=f_01+lambda_A_2v-1-12 f_prime=f_prime_01+lambda_A_2-v-1-12

Component: XB_RU_interaction

k_on=k_w_on1+lambda_A_2w-1-12 k_off=k_w_off1+lambda_A_2-w-1-12