Model Mathematics

Component: Pyr

$dd time Pyr = v1 - v2 + v7$

Component: AcCoA

$dd time AcCoA = v2 - v3$

Component: Cit

$dd time Cit = v3 - v4$

Component: KG

$dd time KG = v4 + v6 - v5$

Component: OAA

$dd time OAA = v5 + v7 - v3 + v8 + v6$

$dd time NAD = vresp - v2 + v4 + 2.0 ⁢ v5$

Component: ATP

$dd time ATP = vATP + v5 - vANT + v7$

Component: delta_psi

$dd time delta_psi = 1 C ⁢ 10 ⁢ vresp - 3 ⁢ vATP + vleak + vANT$

Component: v1

$v1 = k1$

Component: v2

$v2 = k2 ⁢ Pyr ⁢ NAD$

Component: v3

$v3 = k3 ⁢ OAA ⁢ AcCoA$

Component: v4

$v4 = k4 ⁢ Cit ⁢ NAD$

Component: v5

$v5 = k5 ⁢ KG ⁢ NAD ⁢ At - ATP$

Component: v6

$v6 = k6 ⁢ OAA - KG$

Component: v7

$v7 = k7 ⁢ Pyr ⁢ ATP$

Component: v8

$v8 = k8 ⁢ OAA$

Component: vANT

$vANT = kANT ⁢ ATP$

Component: vleak

$vleak = kleak ⁢ delta_psi$

Component: vresp

$vresp = kresp ⁢ Nt - NAD K + Nt - NAD ⁢ 1 1 +ⅇ a ⁢ delta_psi - delta_psi_m$

Component: vATP

$vATP = kATP ⁢ 2 1 +ⅇ b ⁢ ATP - ATP_crit_delta_psi - 1$

Component: ATP_crit_delta_psi

$ATP_crit_delta_psi = At 1 +ⅇ -3 ⁢ delta_G_transport R ⁢ T Kapp ⁢ Pi$$delta_G_transport = 0.0012 ⁢ F ⁢ delta_psi$

Component: model_parameters

Source
Derived from workspace Nazaret, Heiske, Thurley and Mazat, 2009 at changeset 6a7504ae789b.
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