Model Mathematics

Component: environment

Component: rate_constants

kplus_z=bz+czcyclin_CDK_active kminus_z=az kplus_w=bw+cwcyclin_CDK_active kminus_w=aw kplus_i=bi+cicyclin_CDK_active kminus_i=ai

Component: cyclin

ddtimecyclin=k1+k4cyclin_CDK_inactive-k3cyclinCDK-k2+k2uAPCcyclin

Component: cyclin_CDK_inactive

ddtimecyclin_CDK_inactive=k3cyclinCDK+k6cyclin_CDK_active+wee1cyclin_CDK_active1-k4cyclin_CDK_inactive-k5cyclin_CDK_inactive-Cdc25_2Pcyclin_CDK_inactive1

Component: cyclin_CDK_active

ddtimecyclin_CDK_active=k5cyclin_CDK_inactive+Cdc25_2Pcyclin_CDK_inactive1-k6cyclin_CDK_active-wee1cyclin_CDK_active1-k7+k7uAPCcyclin_CDK_active-k14cyclin_CDK_activeCKI+k15cyclin_CDK_CKI+k16+k16uAPCcyclin_CDK_CKI_P

Component: Cdc25

ddtimeCdc25=k8+kminus_zCdc25_P-kplus_zCdc25-k9Cdc25

Component: Cdc25_P

ddtimeCdc25_P=kplus_zCdc25-Cdc25_P+kminus_zCdc25_2P-Cdc25_P-k9Cdc25_P

Component: Cdc25_2P

ddtimeCdc25_2P=kplus_zCdc25_P-kminus_zCdc25_2P-k9Cdc25_2P

Component: wee1

ddtimewee1=k10+kminus_wwee1_P-kplus_wwee1-k11wee1

Component: wee1_P

ddtimewee1_P=kplus_wwee1-kminus_wwee1_P-k11wee1_P

Component: APC

h_x=cyclin_CDK_active2a2+cyclin_CDK_active2 ddtimeAPC=h_x-APCtau

Component: CKI

ddtimeCKI=k12-k13CKI-k14cyclin_CDK_activeCKI+k15cyclin_CDK_CKI

Component: cyclin_CDK_CKI

ddtimecyclin_CDK_CKI=k14cyclin_CDK_activeCKI-k15cyclin_CDK_CKI+kminus_icyclin_CDK_CKI_P-kplus_icyclin_CDK_CKI

Component: cyclin_CDK_CKI_P

ddtimecyclin_CDK_CKI_P=kplus_icyclin_CDK_CKI-kminus_icyclin_CDK_CKI_P-k16+k16uAPCcyclin_CDK_CKI_P

Component: CDK

CDK=CDK_T-cyclin_CDK_active-cyclin_CDK_inactive-cyclin_CDK_CKI-cyclin_CDK_CKI_PCDK_T

Component: cyclin_T

cyclin_T=cyclin+cyclin_CDK_active+cyclin_CDK_inactive