Location: Deforming Heart @ 22780e9f755d / FieldML / heart.xml

Author:
Tommy Yu <tommy.yu@auckland.ac.nz>
Date:
2011-02-15 19:11:01+13:00
Desc:
Adding files and modifications for the json based zinc viewer.
Permanent Source URI:
https://models.physiomeproject.org/workspace/deformingheart/rawfile/22780e9f755dcd6de17b882797f9d1585cc2b6f9/FieldML/heart.xml

<?xml version="1.0" encoding="UTF-8"?>
<fieldml version="0.2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"  xsi:noNamespaceSchemaLocation="Fieldml.xsd">
 <Region name="heart">

  <EnsembleDomain name="heart_mesh.nodes">
   <bounds>
    <ContiguousEnsembleBounds valueCount="5045" />
   </bounds>
  </EnsembleDomain>


  <MeshDomain name="heart_mesh.domain" xiComponentDomain="library.ensemble.xi.3d">
   <bounds>
    <ContiguousEnsembleBounds valueCount="3840"/>
   </bounds>
   <shapes default="library.shape.cube" />
   <pointConnectivity>
    <SimpleMapEntry key="heart_mesh.cube2x2x2_nodes" value="library.local_nodes.cube.2x2x2" />
   </pointConnectivity>
  </MeshDomain>


  <ContinuousVariableEvaluator name="heart_mesh.nodal_dofs" valueDomain="library.real.1d" />


  <ContinuousReferenceEvaluator evaluator="heart_mesh.nodal_dofs" name="heart_mesh.element_params.trilinear_lagrange" valueDomain="library.real.1d">
   <aliases>
    <SimpleMapEntry key="heart_mesh.nodes" value="heart_mesh.cube2x2x2_nodes" />
   </aliases>
  </ContinuousReferenceEvaluator>


  <ContinuousReferenceEvaluator evaluator="library.fem.trilinear_lagrange" name="heart_mesh.trilinear_lagrange" valueDomain="library.real.1d">
   <aliases>
    <SimpleMapEntry key="library.xi.3d" value="heart_mesh.domain.xi" />
    <SimpleMapEntry key="library.parameters.trilinear_lagrange" value="heart_mesh.element_params.trilinear_lagrange" />
   </aliases>
  </ContinuousReferenceEvaluator>


  <ContinuousPiecewiseEvaluator indexDomain="heart_mesh.domain.elements" name="heart_mesh.template.trilinear" valueDomain="library.real.1d">
   <elementEvaluators default="heart_mesh.trilinear_lagrange" />
  </ContinuousPiecewiseEvaluator>


  <ContinuousParameters name="heart_mesh.node.coordinates" valueDomain="library.real.1d">
   <SemidenseData>
    <denseIndexes>
     <entry value="library.ensemble.rc.3d" />
     <entry value="heart_mesh.nodes" />
    </denseIndexes>
    <dataLocation>
     <!--
      The first 5045 lines of this data file list 3 RC coordinates for each of 5045 heart mesh nodes
      at the first of 25 time indexes = the reference state. Coordinates at subsequent time indexes
      follow consecutively; set the line offset to multiples of the number of nodes to read these.
     -->
     <fileData file="heart_mesh.time.node.coordinates" type="lines" offset="0" />
    </dataLocation>
   </SemidenseData>
  </ContinuousParameters>


  <EnsembleParameters name="heart_mesh.cube2x2x2_nodes" valueDomain="heart_mesh.nodes">
   <SemidenseData>
    <denseIndexes>
     <entry value="library.local_nodes.cube.2x2x2" />
     <entry value="heart_mesh.domain.elements" />
    </denseIndexes>
    <dataLocation>
     <fileData file="heart_mesh.connectivity" type="lines" offset="0" />
    </dataLocation>
   </SemidenseData>
  </EnsembleParameters>


  <ContinuousAggregateEvaluator name="heart_mesh.coordinates" valueDomain="library.coordinates.rc.3d">
   <markup>
    <SimpleMapEntry key="field" value="true"/>
   </markup>
   <aliases>
    <SimpleMapEntry key="heart_mesh.nodal_dofs" value="heart_mesh.node.coordinates" />
   </aliases>
   <sourceFields>
    <SimpleMapEntry key="1" value="heart_mesh.template.trilinear" />
    <SimpleMapEntry key="2" value="heart_mesh.template.trilinear" />
    <SimpleMapEntry key="3" value="heart_mesh.template.trilinear" />
   </sourceFields>
  </ContinuousAggregateEvaluator>


 </Region>
</fieldml>