Location: RBS for spaK @ b7b65d8b381d / Bugbuster_RBS_spaK.cellml

Author:
Mike Cooling <m.cooling@auckland.ac.nz>
Date:
2010-12-03 14:18:44+13:00
Desc:
Embedded Templates Workspace
Permanent Source URI:
https://models.physiomeproject.org/workspace/SVP_00000029/rawfile/b7b65d8b381d1fcc06bc6e20d33df2b8898ea0e9/Bugbuster_RBS_spaK.cellml
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<?xml version="1.0" encoding="utf-8"?>
<model name="Bugbuster_RBS_spaK" cmeta:id="Bugbuster_RBS_spaK" 
    xmlns="http://www.cellml.org/cellml/1.1#"
    xmlns:cellml="http://www.cellml.org/cellml/1.1#"
    xmlns:cmeta="http://www.cellml.org/metadata/1.0#"
    xmlns:xlink="http://www.w3.org/1999/xlink"
    xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
    xmlns:dc="http://purl.org/dc/elements/1.0/"
    xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#"
    >
            
    <rdf:RDF>
            <rdf:Description rdf:about="#Bugbuster_RBS_spaK">
            <dc:creator>
            <vCard:N rdf:parseType="Resource">
                <vCard:Family>Cooling</vCard:Family>
                <vCard:Given>Mike</vCard:Given>
            </vCard:N>
            <vCard:EMAIL rdf:parseType="Resource">
                <rdf:value>m.cooling@auckland.ac.nz</rdf:value>
                <rdf:type rdf:resource="http://imc.org/vCard/3.0#internet"/>
            </vCard:EMAIL>
            <vCard:ORG rdf:parseType="Resource">
                <vCard:Orgname>Auckland Bioengineering Institute</vCard:Orgname>
                <vCard:Orgunit>University of Auckland</vCard:Orgunit>
            </vCard:ORG>
            </dc:creator>
            </rdf:Description>
   </rdf:RDF>

  <import xlink:href="SVP_Templates200906/Template_RBS.cellml">
    <units name="nM" units_ref="nM" />
    <units name="femtoliter" units_ref="femtoliter" />
    <units name="RiPsInAttoMoles" units_ref="RiPsInAttoMoles" />
    <units name="RiPs" units_ref="RiPs" />
    <component name="Template_RBS" component_ref="Template_RBS" />
  </import>

   <component name="Bugbuster_RBS_spaK">
    <variable name="localVolume" units="femtoliter" public_interface="in" private_interface="out"/>
    <variable name="RNA" units="nM" public_interface="in" private_interface="out"/>
    <variable name="RNARiPs" units="RiPsInAttoMoles" private_interface="in" public_interface="out" />
    <variable name="k" units="RiPs" initial_value="0.1818" private_interface="out"/>
   </component>
 
   <group>
    <relationship_ref relationship="encapsulation" />
    <component_ref component="Bugbuster_RBS_spaK">
      <component_ref component="Template_RBS" />
    </component_ref>
   </group> 
  
   <connection>
      <map_components component_1="Template_RBS" component_2="Bugbuster_RBS_spaK"/>
      <map_variables variable_1="localVolume" variable_2="localVolume"/>
      <map_variables variable_1="k" variable_2="k"/>
      <map_variables variable_1="RNA" variable_2="RNA"/>
      <map_variables variable_1="RNARiPs" variable_2="RNARiPs"/>
   </connection>

</model>