| 2021-09-14 |
nima |
matplotlib.use('agg') is added
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[files]
[tgz]
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| 2021-09-13 |
nima |
plt.show() was removed
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[files]
[tgz]
[zip] |
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| 2021-08-26 |
nima |
make the figures fonts bigger
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[files]
[tgz]
[zip] |
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| 2021-08-18 |
nima |
make the font bigger
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[files]
[tgz]
[zip] |
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| 2021-07-21 |
nima |
Final versions of figures
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[files]
[tgz]
[zip] |
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| 2021-07-19 |
nima |
run the simulation for a longer time
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[files]
[tgz]
[zip] |
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| 2021-07-19 |
nima |
run the simulation for a longer time to get a better results (Fig 5 and 6)
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[files]
[tgz]
[zip] |
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| 2021-07-14 |
nima |
final check of all the codes
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[files]
[tgz]
[zip] |
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| 2021-07-06 |
nima |
Merge branch 'master' of https://models.physiomeproject.org/workspace/648
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[files]
[tgz]
[zip] |
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| 2021-07-06 |
nima |
Reformat the code for figure 5
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[files]
[tgz]
[zip] |
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| 2021-06-22 |
Alan Garny |
Make our Python scripts PEP 8 compliant.
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[files]
[tgz]
[zip] |
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| 2021-06-22 |
Alan Garny |
Removed .idea folder.
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[files]
[tgz]
[zip] |
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| 2021-06-22 |
nima |
Merge branch 'master' of https://models.physiomeproject.org/workspace/648
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[files]
[tgz]
[zip] |
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| 2021-06-22 |
nima |
Change the scripts for figure 1 and 2
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[files]
[tgz]
[zip] |
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| 2021-06-21 |
Alan Garny |
Python scripts for figures 3 to 7: various cleaning up and file renaming.
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[files]
[tgz]
[zip] |
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| 2021-06-19 |
nima |
1 script instead of 2
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[files]
[tgz]
[zip] |
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| 2021-06-19 |
nima |
Merge branch 'master' of https://models.physiomeproject.org/workspace/648
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[files]
[tgz]
[zip] |
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| 2021-06-19 |
nima |
New implementation for the python codes (having 1 script instead of 2)
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[files]
[tgz]
[zip] |
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| 2021-06-19 |
nima |
New implementation of python codes (having 1 script instead of 2)
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[files]
[tgz]
[zip] |
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| 2021-06-16 |
Alan Garny |
Don't require Tkinter.
This is not needed on macOS (and maybe not on Linux either), but is definitely needed on Windows.
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[files]
[tgz]
[zip] |
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| 2021-06-11 |
Alan Garny |
Merged Figure.py and Figure-plot.py into Figure3-new.py.
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[files]
[tgz]
[zip] |
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| 2021-06-11 |
Alan Garny |
Some minor cleaning up.
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[files]
[tgz]
[zip] |
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| 2021-06-11 |
Alan Garny |
Some minor cleaning up.
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[files]
[tgz]
[zip] |
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| 2021-06-11 |
Alan Garny |
Some minor cleaning up.
|
[files]
[tgz]
[zip] |
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| 2021-06-11 |
Alan Garny |
Make our Python scripts PEP 8 compliant.
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[files]
[tgz]
[zip] |
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| 2021-06-11 |
Alan Garny |
Removed CSV that can be regenerated.
Figure1.csv and Figure2.csv can be generated by running Figure1.sedml and Figure2.sedml, respectively, and then exporting the simulation results to CSV. So, no need for those CSV files to be tracked.
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[files]
[tgz]
[zip] |
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| 2021-06-10 |
nima |
fixing the spaces between sobplots
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[files]
[tgz]
[zip] |
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| 2021-06-10 |
nima |
Files renamed, visualisation improved
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[files]
[tgz]
[zip] |
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| 2021-06-10 |
nima |
minor change
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[files]
[tgz]
[zip] |
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| 2021-06-09 |
nima |
files are renamed
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[files]
[tgz]
[zip] |
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| 2021-06-09 |
nima |
files are renamed
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[files]
[tgz]
[zip] |
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| 2021-06-09 |
nima |
Figure visualisation is improved
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[files]
[tgz]
[zip] |
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| 2021-06-09 |
nima |
Figure visualisation is improved
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[files]
[tgz]
[zip] |
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| 2021-06-02 |
nima |
Better data visualization
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[files]
[tgz]
[zip] |
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| 2021-05-05 |
nima |
Run the model for longer time and capture the results at different time in order to make sure the simulation gets to steady state.
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[files]
[tgz]
[zip] |
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| 2021-04-28 |
nima |
duplicate files are deleted
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[files]
[tgz]
[zip] |
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| 2021-04-28 |
nima |
Updated files with the values in the MATLAB code, results reproduce all the figures except last panel in figure05.png
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[files]
[tgz]
[zip] |
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| 2021-04-09 |
nima |
updated version of figure5 (APD90)
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[files]
[tgz]
[zip] |
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| 2021-03-26 |
nima |
figure 06 and 07 are updated
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[files]
[tgz]
[zip] |
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| 2021-03-22 |
nima |
URL for the sedml file replaced with the name of the sedml file in the folder
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[files]
[tgz]
[zip] |
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| 2021-03-22 |
nima |
Figure 06 and 07 Python codes
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[files]
[tgz]
[zip] |
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| 2021-03-18 |
nima |
Figure05 Python code
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[files]
[tgz]
[zip] |
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| 2021-03-10 |
nima |
Figure04 Python and Sedml
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[files]
[tgz]
[zip] |
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| 2021-03-09 |
nima |
Figure03 cellml and python code
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[files]
[tgz]
[zip] |
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| 2021-03-09 |
nima |
Figure02 sedml
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[files]
[tgz]
[zip] |
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| 2021-03-08 |
nima |
Figure02 of the primary paper (titles added)
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[files]
[tgz]
[zip] |
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| 2021-03-08 |
nima |
Figure02 in the primary paper
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[files]
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