- Author:
- Mabelle Lin <mlin865@aucklanduni.ac.nz>
- Date:
- 2020-11-27 10:31:58+13:00
- Desc:
- Edit README, add config and setting files
- Permanent Source URI:
- https://models.physiomeproject.org/workspace/612/rawfile/cced2c82fead85279d9ab5b4ba36a00df8dadb25/Input-settings.json
{
"generator_settings": {
"deleteElementRanges": "",
"displayAxes": true,
"displayElementAxes": false,
"displayElementNumbers": false,
"displayLines": true,
"displayLinesExterior": false,
"displayMarkerPoints": false,
"displayModelRadius": false,
"displayNodeDerivativeLabels": [
"D3"
],
"displayNodeDerivatives": false,
"displayNodeNumbers": false,
"displayNodePoints": false,
"displaySurfaces": true,
"displaySurfacesExterior": true,
"displaySurfacesTranslucent": false,
"displaySurfacesWireframe": false,
"scaffoldPackage": {
"_ScaffoldPackage": true,
"rotation": [
0.0,
0.0,
0.0
],
"scaffoldSettings": {
"Central path": {
"_ScaffoldPackage": true,
"meshEdits": "EX Version: 2\n Group name: meshEdits\n!#nodeset nodes\nShape. Dimension=0\n#Fields=1\n1) coordinates, coordinate, rectangular cartesian, real, #Components=3\n x. #Values=4 (value,d/ds1,d/ds2,d2/ds1ds2)\n y. #Values=4 (value,d/ds1,d/ds2,d2/ds1ds2)\n z. #Values=4 (value,d/ds1,d/ds2,d2/ds1ds2)\nNode: 1\n 0.000000000000000e+00 6.000000000000000e+00 2.000000000000000e+00 6.000000000000000e+00\n 0.000000000000000e+00 1.200000000000000e+01 1.000000000000000e+00 0.000000000000000e+00\n 0.000000000000000e+00 -2.000000000000000e+00 2.000000000000000e+00 3.000000000000000e+00\nNode: 2\n -2.000000000000000e+00 -8.000000000000000e+00 2.000000000000000e+00 0.000000000000000e+00\n 1.100000000000000e+01 4.000000000000000e+00 2.000000000000000e+00 1.000000000000000e+00\n -3.000000000000000e+00 9.000000000000000e+00 1.000000000000000e+00 2.000000000000000e+00\nNode: 3\n -3.000000000000000e+00 -4.000000000000000e+00 2.000000000000000e+00 1.000000000000000e+00\n 2.000000000000000e+00 -8.000000000000000e+00 -1.000000000000000e+00 0.000000000000000e+00\n 3.000000000000000e+00 0.000000000000000e+00 2.000000000000000e+00 2.000000000000000e+00\nNode: 4\n -1.100000000000000e+01 -8.000000000000000e+00 1.000000000000000e+00 0.000000000000000e+00\n -3.000000000000000e+00 -3.000000000000000e+00 -2.000000000000000e+00 0.000000000000000e+00\n -4.000000000000000e+00 -7.000000000000000e+00 1.000000000000000e+00 5.000000000000000e-01\nNode: 5\n -1.600000000000000e+01 4.000000000000000e+00 1.000000000000000e+00 0.000000000000000e+00\n -4.000000000000000e+00 -3.000000000000000e+00 -3.000000000000000e+00 0.000000000000000e+00\n 0.000000000000000e+00 1.400000000000000e+01 0.000000000000000e+00 5.000000000000000e-01\nNode: 6\n -7.000000000000000e+00 5.000000000000000e+00 0.000000000000000e+00 0.000000000000000e+00\n -8.000000000000000e+00 -1.000000000000000e+00 -3.000000000000000e+00 0.000000000000000e+00\n 0.000000000000000e+00 -1.400000000000000e+01 0.000000000000000e+00 5.000000000000000e-01\nNode: 7\n -1.000000000000000e+00 2.000000000000000e+00 1.000000000000000e+00 0.000000000000000e+00\n -6.000000000000000e+00 -2.000000000000000e+00 -3.000000000000000e+00 0.000000000000000e+00\n -1.000000000000000e+00 9.000000000000000e+00 -1.000000000000000e+00 5.000000000000000e-01\nNode: 8\n -2.000000000000000e+00 -2.000000000000000e+00 1.000000000000000e+00 0.000000000000000e+00\n -1.400000000000000e+01 -4.000000000000000e+00 -2.000000000000000e+00 0.000000000000000e+00\n 5.000000000000000e+00 2.000000000000000e+00 -2.000000000000000e+00 5.000000000000000e-01\n",
"rotation": [
0.0,
0.0,
0.0
],
"scaffoldSettings": {
"Coordinate dimensions": 3,
"D2 derivatives": true,
"D3 derivatives": false,
"Length": 1.0,
"Number of elements": 7
},
"scaffoldTypeName": "1D Path 1",
"scale": [
1.0,
1.0,
1.0
],
"translation": [
0.0,
0.0,
0.0
]
},
"Distal inner radius": 0.7,
"Distal length": 25.0,
"Distal tenia coli width": 1.0,
"Number of segments": 10,
"Proximal inner radius": 1.0,
"Proximal length": 30.0,
"Proximal tenia coli width": 0.5,
"Proximal-transverse inner radius": 0.9,
"Proximal-transverse tenia coli width": 0.7,
"Refine": false,
"Refine number of elements along": 1,
"Refine number of elements around": 1,
"Refine number of elements through wall": 1,
"Segment profile": {
"_ScaffoldPackage": true,
"rotation": [
0.0,
0.0,
0.0
],
"scaffoldSettings": {
"Corner inner radius factor": 0.0,
"End inner radius": 0.94,
"End inner radius derivative": 0.0,
"End tenia coli width": 0.8,
"End tenia coli width derivative": 0.0,
"Haustrum inner radius factor": 0.0,
"Number of elements along segment": 4,
"Number of elements around haustrum": 8,
"Number of elements around tenia coli": 2,
"Number of elements through wall": 1,
"Number of tenia coli": 1,
"Refine": false,
"Refine number of elements along segment": 1,
"Refine number of elements around": 1,
"Refine number of elements through wall": 1,
"Segment length": 50.0,
"Segment length end derivative factor": 0.0,
"Segment length mid derivative factor": 0.0,
"Start inner radius": 0.94,
"Start inner radius derivative": 0.0,
"Start phase": 0.0,
"Start tenia coli width": 0.8,
"Start tenia coli width derivative": 0.0,
"Tenia coli thickness": 0.0,
"Use cross derivatives": false,
"Use linear through wall": true,
"Wall thickness": 0.55
},
"scaffoldTypeName": "3D Colon Segment 1",
"scale": [
1.0,
1.0,
1.0
],
"translation": [
0.0,
0.0,
0.0
]
},
"Start phase": 0.0,
"Transverse length": 20.0,
"Transverse-distal inner radius": 0.7,
"Transverse-distal tenia coli width": 1.0
},
"scaffoldTypeName": "3D Colon 1",
"scale": [
1.0,
1.0,
1.0
],
"translation": [
0.0,
0.0,
0.0
]
}
},
"segmentation_data_settings": {
"displayDataContours": true,
"displayDataMarkerNames": true,
"displayDataMarkerPoints": true,
"displayDataPoints": false,
"displayDataRadius": false
}
}
