Location: viswanathan_shaw_rudy_1999 @ d8a0c2421b39 / figure8.xml

Author:

AnthonyM <amarchand@enseirb.fr>

Date:

2015-08-13 09:47:49+12:00

Desc:

remove documentation

Permanent Source URI:

https://models.physiomeproject.org/workspace/24f/rawfile/d8a0c2421b397bdc8c2356ff2e81ae7f5d579758/figure8.xml

<?xml version="1.0" encoding="utf-8"?>
<sedML  xmlns="http://sed-ml.org/" 
       xmlns:math="http://www.w3.org/1998/Math/MathML" level="1" version="1">
	<listOfSimulations>
		<uniformTimeCourse id="simulation1" initialTime="300000" outputStartTime="0" outputEndTime="500" numberOfPoints="500">
			<algorithm kisaoID="KISAO:0000019" />
		</uniformTimeCourse>
	</listOfSimulations>
	<listOfModels>
		<model id="model1" language="urn:sedml:language:cellml" source="http://models.cellml.org/workspace/24f/rawfile/41ab0ec1fafeb8c1b4a50268e7a7a01319cdc26e/viswanathan_shaw_rudy_1999_a.cellml" />
	</listOfModels>
	<listOfTasks>
		<repeatedTask id="task0" resetModel="True" range="current" modelReference="model1" simulationReference="simulation1" >
			<ranges>
				<vectorRange id="current">
					<value>300</value>

					<value>2000</value>

				</vectorRange>
			</ranges>
			<changes>
				<setValue target="/cellml:model/cellml:component[@name='membrane']/cellml:variable[@name='stim_period']/@initial_value">
					<listOfVariables>
						<variable id="loopValue" name="current loop value"
                        target="#current"/>
					</listOfVariables>
					<math xmlns="http://www.w3.org/1998/Math/MathML">
						<ci>loopValue</ci>
					</math>
				</setValue>
			</changes>
		</repeatedTask>
	</listOfTasks>
	
	
	<listOfDataGenerators>
		<dataGenerator id="time" name="time">
			<listOfVariables>
				<variable id="t" taskReference="task0" target="/cellml:model/cellml:component[@name='environment']/cellml:variable[@name='time']" />
			</listOfVariables>
			<math:math>
				<math:ci>t</math:ci>
			</math:math>
		</dataGenerator>
		<dataGenerator id="Vm1" name="Membrane Potential">
			<listOfVariables>
				<variable id="v1" taskReference="task0" target="/cellml:model/cellml:component[@name='membrane']/cellml:variable[@name='V']" />
			</listOfVariables>
			<math:math>
				<math:ci>v1</math:ci>
			</math:math>
		</dataGenerator>

		<dataGenerator id="GKS" name="G_ks">
			<listOfVariables>
				<variable id="gks" taskReference="task0" target="/cellml:model/cellml:component[@name='slow_delayed_rectifier_potassium_current']/cellml:variable[@name='g_Ks']" />
			</listOfVariables>
			<math:math>
				<math:ci>gks</math:ci>
			</math:math>
		</dataGenerator>

		<dataGenerator id="IKS" name="I_ks">
			<listOfVariables>
				<variable id="iks" taskReference="task0" target="/cellml:model/cellml:component[@name='slow_delayed_rectifier_potassium_current']/cellml:variable[@name='i_Ks']" />
			</listOfVariables>
			<math:math>
				<math:ci>iks</math:ci>
			</math:math>
		</dataGenerator>

		<dataGenerator id="IKR" name="I_kr">
			<listOfVariables>
				<variable id="ikr" taskReference="task0" target="/cellml:model/cellml:component[@name='rapid_delayed_rectifier_potassium_current']/cellml:variable[@name='i_Kr']" />
			</listOfVariables>
			<math:math>
				<math:ci>ikr</math:ci>
			</math:math>
		</dataGenerator>

		<dataGenerator id="ICAL" name="I_Ca_L">
			<listOfVariables>
				<variable id="ical" taskReference="task0" target="/cellml:model/cellml:component[@name='L_type_Ca_channel']/cellml:variable[@name='i_Ca_L']" />
			</listOfVariables>
			<math:math>
				<math:ci>ical</math:ci>
			</math:math>
		</dataGenerator>

		<dataGenerator id="INACA" name="I_NaCa">
			<listOfVariables>
				<variable id="inaca" taskReference="task0" target="/cellml:model/cellml:component[@name='Na_Ca_exchanger']/cellml:variable[@name='i_NaCa']" />
			</listOfVariables>
			<math:math>
				<math:ci>inaca</math:ci>
			</math:math>
		</dataGenerator>

	</listOfDataGenerators>
	<listOfOutputs>
		<plot2D id="plot1" name="Membrane Potential ">
			<listOfCurves>
				<curve id="curve_0" logX="false" logY="false" xDataReference="time" yDataReference="Vm1" />
			</listOfCurves>
		</plot2D>

		<plot2D id="plot2" name="Membrane Potential , Endocardial Model">
			<listOfCurves>
				<curve id="curve_1" logX="false" logY="false" xDataReference="time" yDataReference="GKS" />
			</listOfCurves>
		</plot2D>

		<plot2D id="plot3" name="Membrane Potential , Epicardial Model">
			<listOfCurves>
				<curve id="curve_2" logX="false" logY="false" xDataReference="time" yDataReference="IKS" />
			</listOfCurves>
		</plot2D>

		<plot2D id="plot4" name="Membrane Potential , Epicardial Model">
			<listOfCurves>
				<curve id="curve_3" logX="false" logY="false" xDataReference="time" yDataReference="IKR" />
			</listOfCurves>
		</plot2D>

		<plot2D id="plot5" name="Membrane Potential , Epicardial Model">
			<listOfCurves>
				<curve id="curve_4" logX="false" logY="false" xDataReference="time" yDataReference="ICAL" />
			</listOfCurves>
		</plot2D>

		<plot2D id="plot6" name="Membrane Potential , Epicardial Model">
			<listOfCurves>
				<curve id="curve_5" logX="false" logY="false" xDataReference="time" yDataReference="INACA" />
			</listOfCurves>
		</plot2D>

	</listOfOutputs>
</sedML>