- Author:
- Randall Britten <r.britten@auckland.ac.nz>
- Date:
- 2011-09-19 15:00:19+12:00
- Desc:
- Minor changes in order to make it valid SED-ML.
Used validator ("http://minakata.dyndns.org/SED-ML Web Tools/") and automatic fix tool, as well as editing by hand.
- Permanent Source URI:
- https://models.physiomeproject.org/w/randall/Lorenz_1963/rawfile/943c15bc136e7353cbac583d268a454f9301df38/Lorenz_1963_sedml.xml
<?xml version="1.0" encoding="utf-8"?>
<sedML xmlns="http://sed-ml.org/" xmlns:math="http://www.w3.org/1998/Math/MathML" level="1" version="1">
<listOfSimulations>
<uniformTimeCourse id="simulation1" initialTime="0" outputStartTime="0" outputEndTime="30" numberOfPoints="1000" >
<algorithm kisaoID="KISAO:0000019"/>
</uniformTimeCourse>
</listOfSimulations>
<listOfModels>
<model id="model1" name="Lorenz_1963" language="urn:sedml:language:cellml" source="http://models.cellml.org/w/randall/Lorenz_1963/@@rawfile/13da307bb6707a4040d00556202280c13a19a105/Lorenz_1963.cellml"/>
</listOfModels>
<listOfTasks>
<task id="task1" name="Phase space trajectory" modelReference="model1" simulationReference="simulation1"/>
</listOfTasks>
<listOfDataGenerators>
<dataGenerator id="t" name="t">
<listOfVariables>
<variable id="variable_t" taskReference="task1" target="/cellml:model/cellml:component[@name='Main']/cellml:variable[@name='t']" />
</listOfVariables>
<math:math>
<math:ci>variable_t</math:ci>
</math:math>
</dataGenerator>
<dataGenerator id="x" name="x">
<listOfVariables>
<variable id="variable_x" taskReference="task1" target="/cellml:model/cellml:component[@name='Main']/cellml:variable[@name='x']" />
</listOfVariables>
<math:math>
<math:ci>variable_x</math:ci>
</math:math>
</dataGenerator>
<dataGenerator id="y" name="y">
<listOfVariables>
<variable id="variable_y" taskReference="task1" target="/cellml:model/cellml:component[@name='Main']/cellml:variable[@name='y']" />
</listOfVariables>
<math:math>
<math:ci>variable_y</math:ci>
</math:math>
</dataGenerator>
<dataGenerator id="z" name="z">
<listOfVariables>
<variable id="variable_z" taskReference="task1" target="/cellml:model/cellml:component[@name='Main']/cellml:variable[@name='z']" />
</listOfVariables>
<math:math>
<math:ci>variable_z</math:ci>
</math:math>
</dataGenerator>
</listOfDataGenerators>
<listOfOutputs>
<plot2D id="plot1" name="Phase space trajectory xy">
<listOfCurves>
<curve id="p1c1" logX="false" logY="false" xDataReference="x" yDataReference="y" />
</listOfCurves>
</plot2D>
<plot2D id="plot2" name="Phase space trajectory xz">
<listOfCurves>
<curve id="p2c1" logX="false" logY="false" xDataReference="x" yDataReference="z" />
</listOfCurves>
</plot2D>
<plot2D id="plot3" name="Phase space trajectory yz">
<listOfCurves>
<curve id="p3c1" logX="false" logY="false" xDataReference="y" yDataReference="z" />
</listOfCurves>
</plot2D>
<plot2D id="plot4" name="Timeseries">
<listOfCurves>
<curve id="p4c1" logX="false" logY="false" xDataReference="t" yDataReference="x" />
<curve id="p4c2" logX="false" logY="false" xDataReference="t" yDataReference="y" />
<curve id="p4c3" logX="false" logY="false" xDataReference="t" yDataReference="z" />
</listOfCurves>
</plot2D>
</listOfOutputs>
</sedML>