Location: Mitochondria regulate the amplitude of simple and complex calcium oscillations @ f78690e2f464 / grubelnik_2001_4a.session.xml

Author:
Hanne Nielsen <hnie010@aucklanduni.ac.nz>
Date:
2011-09-26 13:51:05+13:00
Desc:
Added cellML models for 2a, 2b, 3a, 3b, 4a and 4b and clickable sessions.
Permanent Source URI:
https://models.physiomeproject.org/w/hnielsen/grubelnik_2001/rawfile/f78690e2f46454aa4ef277c8a5e8eabda2b8759c/grubelnik_2001_4a.session.xml
Compare... Download Source 

<?xml version="1.0"?>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"><rdf:Description rdf:about="http://www.cellml.org/tools/opencell/splitter/graph_sel_graph1"><activegraph xmlns="http://www.cellml.org/tools/opencell/"><rdf:Description rdf:nodeID="n1"/></activegraph></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/pcenv/loadedModels"><rdf:_2><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml"/></rdf:_2></rdf:Description><rdf:Description rdf:nodeID="n2"><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml#Ca_cyt_Ca_cyt"/></variable></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/opencell/splitter/intergraph2"><splitterState_collapsedAfter xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">true</splitterState_collapsedAfter></rdf:Description><rdf:Description rdf:nodeID="n3"><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml#Pr_Pr"/></variable></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/opencell/splitter/graph_key_graph3"><splitterState_nextHeight xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">0</splitterState_nextHeight><splitterState_collapsedAfter xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">true</splitterState_collapsedAfter></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/pcenv/splitter/graph_key_graph1"><splitterState_nextHeight xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">0</splitterState_nextHeight><splitterState_collapsedAfter xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">true</splitterState_collapsedAfter></rdf:Description><rdf:Description rdf:nodeID="n4"><rdf:rest><rdf:Description rdf:about="http://www.w3.org/1999/02/22-rdf-syntax-ns#nil"/></rdf:rest><rdf:first><rdf:Description rdf:nodeID="n1"/></rdf:first></rdf:Description><rdf:Description rdf:nodeID="n5"><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml#environment_time"/></variable></rdf:Description><rdf:Description rdf:nodeID="n6"><rdf:rest><rdf:Description rdf:about="http://www.w3.org/1999/02/22-rdf-syntax-ns#nil"/></rdf:rest><rdf:first><rdf:Description rdf:nodeID="n7"/></rdf:first></rdf:Description><rdf:Description rdf:nodeID="n8"><rdf:rest><rdf:Description rdf:nodeID="n9"/></rdf:rest><rdf:first><rdf:Description rdf:nodeID="n10"/></rdf:first></rdf:Description><rdf:Description rdf:nodeID="n11"><graphname xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">Clickable SVG</graphname><externalurl xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001.xul</externalurl><externalurl xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001.xul</externalurl><graphname xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">Clickable SVG</graphname></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/opencell/splitter/graph_sel_graph3"><activegraph xmlns="http://www.cellml.org/tools/opencell/"><rdf:Description rdf:nodeID="n12"/></activegraph></rdf:Description><rdf:Description rdf:nodeID="n13"><type xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#scatter"/></type><glyph xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#nonstandard-none"/></glyph><colour xmlns="http://www.cellml.org/metadata/graphs/1.0#" xml:lang="en">#6fc4c7</colour><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#x-"><rdf:Description rdf:nodeID="n14"/></variable><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#y-"><rdf:Description rdf:nodeID="n15"/></variable></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/pcenv/splitter/graph_sel_graph1"><activegraph xmlns="http://www.cellml.org/tools/pcenv/"><rdf:Description rdf:nodeID="n1"/></activegraph></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/pcenv/splitter/graph_sel_graph2"><activegraph xmlns="http://www.cellml.org/tools/pcenv/"><rdf:Description rdf:nodeID="n11"/></activegraph></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/pcenv/splitter/intergraph2"><splitterState_collapsedAfter xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">true</splitterState_collapsedAfter></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/pcenv/displayGraphs"><rdf:first><rdf:Description rdf:nodeID="n16"/></rdf:first></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/pcenv/splitter/graph_key_graph2"><splitterState_nextHeight xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">0</splitterState_nextHeight><splitterState_collapsedAfter xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">true</splitterState_collapsedAfter></rdf:Description><rdf:Description rdf:nodeID="n7"><type xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#line"/></type><colour xmlns="http://www.cellml.org/metadata/graphs/1.0#" xml:lang="en">#099999</colour><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#x-"><rdf:Description rdf:nodeID="n17"/></variable><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#y-"><rdf:Description rdf:nodeID="n18"/></variable></rdf:Description><rdf:Description rdf:nodeID="n19"><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml#environment_time"/></variable></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/opencell/splitter/graph_key_graph1"><splitterState_nextHeight xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">0</splitterState_nextHeight><splitterState_collapsedAfter xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">true</splitterState_collapsedAfter></rdf:Description><rdf:Description rdf:nodeID="n20"><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml#J_ERpump_J_ERpump"/></variable></rdf:Description><rdf:Description rdf:nodeID="n21"><rdf:first><rdf:Description rdf:nodeID="n8"/></rdf:first></rdf:Description><rdf:Description rdf:nodeID="n16"><rdf:rest><rdf:Description rdf:nodeID="n22"/></rdf:rest><rdf:first><rdf:Description rdf:nodeID="n12"/></rdf:first></rdf:Description><rdf:Description rdf:nodeID="n23"><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml#environment_time"/></variable></rdf:Description><rdf:Description rdf:nodeID="n24"><rdf:rest><rdf:Description rdf:about="http://www.w3.org/1999/02/22-rdf-syntax-ns#nil"/></rdf:rest><rdf:first><rdf:Description rdf:nodeID="n25"/></rdf:first></rdf:Description><rdf:Description rdf:nodeID="n26"><rdf:rest><rdf:Description rdf:nodeID="n24"/></rdf:rest><rdf:first><rdf:Description rdf:nodeID="n13"/></rdf:first></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/opencell/displayGraphs"><rdf:first><rdf:Description rdf:nodeID="n16"/></rdf:first></rdf:Description><rdf:Description rdf:nodeID="n27"><rdf:first><rdf:Description rdf:nodeID="n6"/></rdf:first></rdf:Description><rdf:Description rdf:nodeID="n28"><rdf:rest><rdf:Description rdf:nodeID="n26"/></rdf:rest><rdf:first><rdf:Description rdf:nodeID="n29"/></rdf:first></rdf:Description><rdf:Description rdf:nodeID="n22"><rdf:rest><rdf:Description rdf:nodeID="n4"/></rdf:rest><rdf:first><rdf:Description rdf:nodeID="n11"/></rdf:first></rdf:Description><rdf:Description rdf:nodeID="n30"><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml#environment_time"/></variable></rdf:Description><rdf:Description rdf:nodeID="n31"><type xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#scatter"/></type><glyph xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#nonstandard-none"/></glyph><colour xmlns="http://www.cellml.org/metadata/graphs/1.0#" xml:lang="en">#e2150a</colour><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#x-"><rdf:Description rdf:nodeID="n23"/></variable><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#y-"><rdf:Description rdf:nodeID="n32"/></variable></rdf:Description><rdf:Description rdf:nodeID="n15"><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml#J_ERleak_J_ERleak"/></variable></rdf:Description><rdf:Description rdf:nodeID="n33"><rdf:rest><rdf:Description rdf:nodeID="n28"/></rdf:rest><rdf:first><rdf:Description rdf:nodeID="n34"/></rdf:first></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/pcenv/splitter/graph_sel_graph3"><activegraph xmlns="http://www.cellml.org/tools/pcenv/"><rdf:Description rdf:nodeID="n12"/></activegraph></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/opencell/splitter/graph_key_graph2"><splitterState_nextHeight xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">0</splitterState_nextHeight><splitterState_collapsedAfter xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">true</splitterState_collapsedAfter></rdf:Description><rdf:Description rdf:nodeID="n35"><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml#environment_time"/></variable></rdf:Description><rdf:Description rdf:nodeID="n9"><rdf:rest><rdf:Description rdf:nodeID="n33"/></rdf:rest><rdf:first><rdf:Description rdf:nodeID="n31"/></rdf:first></rdf:Description><rdf:Description rdf:nodeID="n29"><type xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#scatter"/></type><glyph xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#nonstandard-none"/></glyph><colour xmlns="http://www.cellml.org/metadata/graphs/1.0#" xml:lang="en">#85b060</colour><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#x-"><rdf:Description rdf:nodeID="n30"/></variable><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#y-"><rdf:Description rdf:nodeID="n20"/></variable></rdf:Description><rdf:Description rdf:nodeID="n1"><decoration xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#none"/></decoration><graphname xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">Traces against Time</graphname><scaling xmlns="http://www.cellml.org/metadata/graphs/1.0#y-"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#identity"/></scaling><scaling xmlns="http://www.cellml.org/metadata/graphs/1.0#x-"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#identity"/></scaling><traces xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:nodeID="n21"/></traces><graphname xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">Traces against Time</graphname></rdf:Description><rdf:Description rdf:nodeID="n12"><decoration xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#none"/></decoration><graphname xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">Untitled</graphname><scaling xmlns="http://www.cellml.org/metadata/graphs/1.0#y-"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#identity"/></scaling><scaling xmlns="http://www.cellml.org/metadata/graphs/1.0#x-"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#identity"/></scaling><traces xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:nodeID="n27"/></traces><graphname xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">Untitled</graphname></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/pcenv/splitter/graph_key_graph3"><splitterState_nextHeight xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">0</splitterState_nextHeight><splitterState_collapsedAfter xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">true</splitterState_collapsedAfter></rdf:Description><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml"><modelname xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">grubelnik_2001_4a</modelname><modelname xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">grubelnik_2001_4a</modelname><derivedmodels xmlns="http://www.cellml.org/tools/pcenv/"><rdf:Description rdf:nodeID="n36"/></derivedmodels><derivedmodels xmlns="http://www.cellml.org/tools/opencell/"><rdf:Description rdf:nodeID="n36"/></derivedmodels><modelfrozen xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">true</modelfrozen><modelfrozen xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">true</modelfrozen></rdf:Description><rdf:Description rdf:nodeID="n34"><type xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#scatter"/></type><glyph xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#nonstandard-none"/></glyph><colour xmlns="http://www.cellml.org/metadata/graphs/1.0#" xml:lang="en">#b5e5f6</colour><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#x-"><rdf:Description rdf:nodeID="n19"/></variable><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#y-"><rdf:Description rdf:nodeID="n37"/></variable></rdf:Description><rdf:Description rdf:nodeID="n32"><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml#Ca_ER_Ca_ER"/></variable></rdf:Description><rdf:Description rdf:nodeID="n10"><type xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#scatter"/></type><glyph xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#nonstandard-none"/></glyph><colour xmlns="http://www.cellml.org/metadata/graphs/1.0#" xml:lang="en">#099999</colour><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#x-"><rdf:Description rdf:nodeID="n35"/></variable><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#y-"><rdf:Description rdf:nodeID="n2"/></variable></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/pcenv/modlayoutsplit"><splitterState_prevWidth xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">196</splitterState_prevWidth></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/opencell/modlayoutsplit"><splitterState_prevWidth xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">196</splitterState_prevWidth><splitterState_nextWidth xmlns="http://www.cellml.org/tools/pcenv/" xml:lang="en">1062</splitterState_nextWidth><splitterState_nextWidth xmlns="http://www.cellml.org/tools/opencell/" xml:lang="en">1062</splitterState_nextWidth></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/opencell/splitter/graph_sel_graph2"><activegraph xmlns="http://www.cellml.org/tools/opencell/"><rdf:Description rdf:nodeID="n11"/></activegraph></rdf:Description><rdf:Description rdf:about="http://www.cellml.org/tools/opencell/loadedModels"><rdf:_1><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml"/></rdf:_1></rdf:Description><rdf:Description rdf:nodeID="n14"><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml#environment_time"/></variable></rdf:Description><rdf:Description rdf:nodeID="n25"><type xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#scatter"/></type><glyph xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="http://www.cellml.org/metadata/graphs/1.0#nonstandard-none"/></glyph><colour xmlns="http://www.cellml.org/metadata/graphs/1.0#" xml:lang="en">#5e799f</colour><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#x-"><rdf:Description rdf:nodeID="n5"/></variable><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#y-"><rdf:Description rdf:nodeID="n3"/></variable></rdf:Description><rdf:Description rdf:nodeID="n37"><variable xmlns="http://www.cellml.org/metadata/graphs/1.0#"><rdf:Description rdf:about="file:///Users/Hanne/Desktop/repository%20models/grubelnik_2001/grubelnik_2001_4a.cellml#J_ERch_J_ERch"/></variable></rdf:Description></rdf:RDF>