- Author:
- David Nickerson <nickerso@users.sourceforge.net>
- Date:
- 2013-05-04 07:40:04+12:00
- Desc:
- adding initial TODO list to keep track of what I need to do to get things working with more recent tools than my original CellMLSimulator that I used in this paper
- Permanent Source URI:
- https://models.physiomeproject.org/w/andre/nickerson-2008/rawfile/d6328d18c94e9dad70f4d0e4b250e89429773b62/IK1-pH_clamp-graphs.rdf
<?xml version="1.0" encoding="iso-8859-1"?>
<rdf:RDF
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:cs="http://www.cellml.org/metadata/simulation/1.0#"
xmlns:cg="http://www.cellml.org/metadata/graphs/1.0#"
xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description>
<cg:graph>
<rdf:Description rdf:ID="IK1_pH_clamp_unit_amp">
<cg:x-label>Intracellular proton concentration (mM)</cg:x-label>
<cg:x-scaling>log10</cg:x-scaling>
<cg:y-label>Relative unit amplitude ()</cg:y-label>
<cg:background-colour>#ffffff</cg:background-colour>
<cg:traces rdf:parseType="Collection">
<rdf:Description>
<cg:type rdf:resource="http://www.cellml.org/metadata/graphs/1.0#line"/>
<cg:colour>#ff0000</cg:colour>
<cg:line-type>1</cg:line-type>
<cg:x-variable rdf:parseType="Resource">
<cs:simulation rdf:resource="TNNP-extended/experiments/IK1-pH_clamp.xml#IK1_pH_clamp_simulation"/>
<cg:variable rdf:resource="TNNP-extended/experiments/IK1-pH_clamp.xml#H_i"/>
<!--
<cg:minimum rdf:datatype="http://www.w3.org/2001/XMLSchema#double">450</cg:minimum>
<cg:maximum rdf:datatype="http://www.w3.org/2001/XMLSchema#double">850</cg:maximum>
-->
</cg:x-variable>
<cg:y-variable rdf:parseType="Resource">
<cs:simulation rdf:resource="TNNP-extended/experiments/IK1-pH_clamp.xml#IK1_pH_clamp_simulation"/>
<cg:variable rdf:resource="TNNP-extended/components/IK1.xml#IK1max"/>
</cg:y-variable>
<bqmodel:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="TNNP-extended/components/IK1-pH-fit-unit_amp.rdf"/>
</rdf:Bag>
</bqmodel:isDescribedBy>
</rdf:Description>
</cg:traces>
</rdf:Description>
</cg:graph>
<cg:graph>
<rdf:Description rdf:ID="IK1_pH_clamp_NPo">
<cg:x-label>Intracellular proton concentration (mM)</cg:x-label>
<cg:x-scaling>log10</cg:x-scaling>
<cg:y-label>Relative open probability ()</cg:y-label>
<cg:background-colour>#ffffff</cg:background-colour>
<cg:traces rdf:parseType="Collection">
<rdf:Description>
<cg:type rdf:resource="http://www.cellml.org/metadata/graphs/1.0#line"/>
<cg:colour>#ff0000</cg:colour>
<cg:line-type>1</cg:line-type>
<cg:x-variable rdf:parseType="Resource">
<cs:simulation rdf:resource="TNNP-extended/experiments/IK1-pH_clamp.xml#IK1_pH_clamp_simulation"/>
<cg:variable rdf:resource="TNNP-extended/experiments/IK1-pH_clamp.xml#H_i"/>
<!--
<cg:minimum rdf:datatype="http://www.w3.org/2001/XMLSchema#double">450</cg:minimum>
<cg:maximum rdf:datatype="http://www.w3.org/2001/XMLSchema#double">850</cg:maximum>
-->
</cg:x-variable>
<cg:y-variable rdf:parseType="Resource">
<cs:simulation rdf:resource="TNNP-extended/experiments/IK1-pH_clamp.xml#IK1_pH_clamp_simulation"/>
<cg:variable rdf:resource="TNNP-extended/components/IK1.xml#NPo"/>
</cg:y-variable>
</rdf:Description>
</cg:traces>
</rdf:Description>
</cg:graph>
</rdf:Description>
</rdf:RDF>