Location: Andre's Hodgkin Huxley model @ 957c2190e1ee / experiments / periodic-IStim-protocol.xml

Author:
David Nickerson <nickerso@users.sourceforge.net>
Date:
2015-05-25 08:31:46+12:00
Desc:
adding a SED-ML document which does nested repeated tasks to iterate over clamp potential and temperature; doesn't work with get-sed-ml-client
Permanent Source URI:
https://models.physiomeproject.org/w/andre/HH/rawfile/957c2190e1eed47d7634613250bc274dc836b826/experiments/periodic-IStim-protocol.xml

<?xml version="1.0" encoding="iso-8859-1"?>
<model xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:cmeta="http://www.cellml.org/metadata/1.0#" xmlns:xlink="http://www.w3.org/1999/xlink" name="periodic_IStim" cmeta:id="periodic_IStim">
  

  <import xlink:href="../components/units.xml">
    <units name="ms" units_ref="ms"/>
    <units name="uA_per_cmsq" units_ref="uA_per_cmsq"/>
  </import>

  <component name="stimulus_protocol" cmeta:id="stimulus_protocol">
    
    <variable cmeta:id="IStim" name="IStim" public_interface="out" units="uA_per_cmsq"/>
    <variable name="time" public_interface="in" units="ms"/>
    <variable name="stimPeriod" public_interface="in" units="ms"/>
    <variable name="stimDuration" public_interface="in" units="ms"/>
    <variable name="stimCurrent" public_interface="in" units="uA_per_cmsq"/>
    <math xmlns="http://www.w3.org/1998/Math/MathML">
      <apply id="stimulus_calculation"><eq/>
        <ci>IStim</ci>
        <piecewise>
          <piece>
            <ci>stimCurrent</ci>
            <apply><lt/>
              <apply><rem/>
                <ci>time</ci>
                <ci>stimPeriod</ci>
              </apply>
              <ci>stimDuration</ci>
            </apply>
          </piece>
          <otherwise>
            <cn cellml:units="uA_per_cmsq">0.0</cn>
          </otherwise>
        </piecewise>
      </apply>
    </math>
  </component>
</model>