- Author:
- David Nickerson <nickerso@users.sourceforge.net>
- Date:
- 2015-05-25 08:31:46+12:00
- Desc:
- adding a SED-ML document which does nested repeated tasks to iterate over clamp potential and temperature; doesn't work with get-sed-ml-client
- Permanent Source URI:
- https://models.physiomeproject.org/w/andre/HH/rawfile/957c2190e1eed47d7634613250bc274dc836b826/components/INa-gating-rates.xml
<?xml version="1.0" encoding="iso-8859-1"?>
<model xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:cmeta="http://www.cellml.org/metadata/1.0#" xmlns:xlink="http://www.w3.org/1999/xlink" name="INa_gating_rates" cmeta:id="INa_gating_rates_model">
<import xlink:href="units.xml">
<units name="K" units_ref="K"/>
<units name="ms" units_ref="ms"/>
<units name="mV" units_ref="mV"/>
<units name="per_ms" units_ref="per_ms"/>
<units name="per_ms_mV" units_ref="per_ms_mV"/>
<units name="uA_per_cmsq" units_ref="uA_per_cmsq"/>
<units name="mS_per_cmsq" units_ref="mS_per_cmsq"/>
</import>
<component name="alpha_m" cmeta:id="alpha_m_component">
<variable cmeta:id="alpha_m" name="alpha" public_interface="out" private_interface="out" units="per_ms"/>
<variable cmeta:id="alpha_m_base" name="alpha_base" public_interface="out" private_interface="out" units="per_ms"/>
<variable cmeta:id="alpha_m_Q10" name="Q10" public_interface="in" private_interface="out" units="dimensionless"/>
<variable cmeta:id="alpha_m_T" name="T" public_interface="in" private_interface="out" units="K"/>
<variable cmeta:id="alpha_m_Tref" name="Tref" public_interface="in" private_interface="out" units="K"/>
<variable cmeta:id="alpha_m_V" name="V" public_interface="in" private_interface="out" units="mV"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply id="alpha_m_base_calculation"><eq/>
<ci>alpha_base</ci>
<apply><divide/>
<apply><times/>
<cn cellml:units="per_ms_mV">0.1</cn>
<apply><plus/>
<ci>V</ci>
<cn cellml:units="mV">25.0</cn>
</apply>
</apply>
<apply><minus/>
<apply><exp/>
<apply><divide/>
<apply><plus/>
<ci>V</ci>
<cn cellml:units="mV">25.0</cn>
</apply>
<cn cellml:units="mV">10.0</cn>
</apply>
</apply>
<cn cellml:units="dimensionless">1.0</cn>
</apply>
</apply>
</apply>
</math>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply id="alpha_m_calculation"><eq/>
<ci>alpha</ci>
<apply><times/>
<apply><power/>
<ci>Q10</ci>
<apply><divide/>
<apply><minus/>
<ci>T</ci>
<ci>Tref</ci>
</apply>
<cn cellml:units="K">10.0</cn>
</apply>
</apply>
<ci>alpha_base</ci>
</apply>
</apply>
</math>
</component>
<component name="beta_m" cmeta:id="beta_m_component">
<variable cmeta:id="beta_m" name="beta" public_interface="out" private_interface="out" units="per_ms"/>
<variable cmeta:id="beta_m_base" name="beta_base" public_interface="out" private_interface="out" units="per_ms"/>
<variable cmeta:id="beta_m_Q10" name="Q10" public_interface="in" private_interface="out" units="dimensionless"/>
<variable cmeta:id="beta_m_T" name="T" public_interface="in" private_interface="out" units="K"/>
<variable cmeta:id="beta_m_Tref" name="Tref" public_interface="in" private_interface="out" units="K"/>
<variable cmeta:id="beta_m_V" name="V" public_interface="in" private_interface="out" units="mV"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply id="beta_m_base_calculation"><eq/>
<ci>beta_base</ci>
<apply><times/>
<cn cellml:units="per_ms">4.0</cn>
<apply><exp/>
<apply><divide/>
<ci>V</ci>
<cn cellml:units="mV">18.0</cn>
</apply>
</apply>
</apply>
</apply>
</math>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply id="beta_m_calculation"><eq/>
<ci>beta</ci>
<apply><times/>
<apply><power/>
<ci>Q10</ci>
<apply><divide/>
<apply><minus/>
<ci>T</ci>
<ci>Tref</ci>
</apply>
<cn cellml:units="K">10.0</cn>
</apply>
</apply>
<ci>beta_base</ci>
</apply>
</apply>
</math>
</component>
<component name="alpha_h" cmeta:id="alpha_h_component">
<variable cmeta:id="alpha_h" name="alpha" public_interface="out" private_interface="out" units="per_ms"/>
<variable cmeta:id="alpha_h_base" name="alpha_base" public_interface="out" private_interface="out" units="per_ms"/>
<variable cmeta:id="alpha_h_Q10" name="Q10" public_interface="in" private_interface="out" units="dimensionless"/>
<variable cmeta:id="alpha_h_T" name="T" public_interface="in" private_interface="out" units="K"/>
<variable cmeta:id="alpha_h_Tref" name="Tref" public_interface="in" private_interface="out" units="K"/>
<variable cmeta:id="alpha_h_V" name="V" public_interface="in" private_interface="out" units="mV"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply id="alpha_h_base_calculation"><eq/>
<ci>alpha_base</ci>
<apply><times/>
<cn cellml:units="per_ms">0.07</cn>
<apply><exp/>
<apply><divide/>
<ci>V</ci>
<cn cellml:units="mV">20.0</cn>
</apply>
</apply>
</apply>
</apply>
</math>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply id="alpha_h_calculation"><eq/>
<ci>alpha</ci>
<apply><times/>
<apply><power/>
<ci>Q10</ci>
<apply><divide/>
<apply><minus/>
<ci>T</ci>
<ci>Tref</ci>
</apply>
<cn cellml:units="K">10.0</cn>
</apply>
</apply>
<ci>alpha_base</ci>
</apply>
</apply>
</math>
</component>
<component name="beta_h" cmeta:id="beta_h_component">
<variable cmeta:id="beta_h" name="beta" public_interface="out" private_interface="out" units="per_ms"/>
<variable cmeta:id="beta_h_base" name="beta_base" public_interface="out" private_interface="out" units="per_ms"/>
<variable cmeta:id="beta_h_Q10" name="Q10" public_interface="in" private_interface="out" units="dimensionless"/>
<variable cmeta:id="beta_h_T" name="T" public_interface="in" private_interface="out" units="K"/>
<variable cmeta:id="beta_h_Tref" name="Tref" public_interface="in" private_interface="out" units="K"/>
<variable cmeta:id="beta_h_V" name="V" public_interface="in" private_interface="out" units="mV"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply id="beta_h_base_calculation"><eq/>
<ci>beta_base</ci>
<apply><divide/>
<cn cellml:units="per_ms">1.0</cn>
<apply><plus/>
<apply><exp/>
<apply><divide/>
<apply><plus/>
<ci>V</ci>
<cn cellml:units="mV">30.0</cn>
</apply>
<cn cellml:units="mV">10.0</cn>
</apply>
</apply>
<cn cellml:units="dimensionless">1.0</cn>
</apply>
</apply>
</apply>
</math>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply id="beta_h_calculation"><eq/>
<ci>beta</ci>
<apply><times/>
<apply><power/>
<ci>Q10</ci>
<apply><divide/>
<apply><minus/>
<ci>T</ci>
<ci>Tref</ci>
</apply>
<cn cellml:units="K">10.0</cn>
</apply>
</apply>
<ci>beta_base</ci>
</apply>
</apply>
</math>
</component>
</model>
