Location: Andre's Hodgkin Huxley model @ 56a17e5c445c / index.html
- Author:
- David Nickerson <nickerso@users.sourceforge.net>
- Date:
- 2015-05-24 21:13:19+12:00
- Desc:
- adding missing CellML namespace to allow XPath expressions to be resolved; change to using local CellML model rather than the one from the repository; adding a report output as that is the only kind of output currently supported by get-sed-ml-client
- Permanent Source URI:
- https://models.physiomeproject.org/w/andre/HH/rawfile/56a17e5c445cf4cab3eac02c2183f4e624823e37/index.html
This workspace holds my encoding of the Hodgkin & Huxley (1952) model. It is also a useful example to use for explaining the basics of CellML.
Direct links to some of the useful documents in this workspace:
- The complete Hodgkin & Huxley mathematical model:
components/stimulated.xml; the base model to be instantiated into specific simulation experiments. - The complete set of default parameter values and initial conditions from the HH paper:
components/default-variable-values.xml - The HH model configured and parameterised with an applied periodic stimulus current:
experiments/periodic-stimulus.xml - A SED-ML description of a simulation experiment for the periodic stimulus experiment:
sed-ml/periodic-stimulus.xml; can be used in the SED-ML Web Tools to produce the results shown in the tutorial.