Y1
concentration of the active cytoplasmic messenger
2008-10-20T14:44:37+13:00
May
Catherine
Lloyd
0.01
10000
true
false
0.1
80
The University of Auckland
Auckland Bioengineering Institute
C
Goodwin
Brian
Oscillatory behavior in enzymatic control processes (Model 1)
circadian rhythms
2008-09-26T00:00:00+00:00
Oscillatory behavior in enzymatic control processes
438
425
3
keyword
circadian rhythms
5861813
Catherine Lloyd
concentration of mRNA of the 1st species
X1
Oscillatory behavior in enzymatic control processes
3
438
425
C
Goodwin
Brian
This CellML model runs in both PCEnv and COR to recreate the published results. The units have been checked and they are consistent. This particular version of the model describes the first control system with non-interacting oscillations.
425
3
438
Oscillatory behavior in enzymatic control processes
This CellML model runs in both PCEnv and COR to recreate the published results. The units have been checked and they are consistent. This particular version of the model describes the second control system with interactions between non-linear oscillations.
Added simulation metadata, cmeta:id's to some variables
X2
concentration of mRNA of the 2nd species
keyword
Oscillatory behavior in enzymatic control processes (Model 3)
Y2
concentration of protein of the 2nd species
c.lloyd@auckland.ac.nz
c.lloyd@auckland.ac.nz
Catherine Lloyd
0.1
100
10000
The University of Auckland
Auckland Bioengineering Institute
Advances in Enzyme Regulation
Goodwin
Catherine Lloyd
Brian
Oscillatory behavior in enzymatic control processes (Model 2)
2008-09-26T00:00:00+00:00
circadian rhythms
This CellML model runs in both PCEnv and COR to recreate the published results. The units have been checked and they are consistent. This particular version of the model describes the first control system with non-interacting oscillations.
5
This CellML model runs in both PCEnv and COR, however it does not recreate the published results - the CellML model does not oscillate. The units have been checked and they are consistent. This particular version of the model describes the third control system of a circuit with limit cycles. We suspect the CellML model does not oscillate because it does not include time delays. These are mentioned in the main body of text in the published paper, but they are not descibed mathematically in the model equations.
Auckland Bioengineering Institute
The University of Auckland
Xi
concentration of mRNA of the ith species
This CellML model runs in both PCEnv and COR to recreate the published results. The units have been checked and they are consistent. This particular version of the model describes the second control system with interactions between non-linear oscillations.
concentration of the active enzyme
Z1
concentration of the nuclear messenger
X1
Catherine
Lloyd
May
c.lloyd@auckland.ac.nz
concentration of protein of the ith species
Yi
1965-00-00 00:00
concentration of protein of the 1st species
Y1
5861813
keyword
1965-00-00 00:00
Catherine
Lloyd
May
Catherine Lloyd
Advances in Enzyme Regulation
James
Lawson
Advances in Enzyme Regulation
2008-09-26T00:00:00+00:00
1965-00-00 00:00
Catherine Lloyd
Catherine Lloyd