Generated Code

/*
   There are a total of 6 entries in the algebraic variable array.
   There are a total of 4 entries in each of the rate and state variable arrays.
   There are a total of 17 entries in the constant variable array.
 */
/*
 * VOI is time in component temporalExistence (second).
 * CONSTANTS[0] is alphaTF in component Device_TFgenerator (uM_per_second).
 * CONSTANTS[14] is JTF in component Device_TFgenerator (uM_per_second).
 * STATES[0] is TFS in component BioEnv_TFSAssociation (uM).
 * ALGEBRAIC[5] is Jgain_TF in component BioEnv_TFSAssociation_interface (uM_per_second).
 * CONSTANTS[15] is Jgain_TFS in component BioEnv_TFSAssociation_interface (uM_per_second).
 * ALGEBRAIC[3] is JTF in component Device_PhzMSgenerator (uM_per_second).
 * STATES[1] is TF in component BioEnv_TFSAssociation (uM).
 * CONSTANTS[1] is s in component BioEnv_TFSAssociation (uM).
 * CONSTANTS[2] is betaTFS in component BioEnv_TFSAssociation (per_uM_per_second).
 * CONSTANTS[3] is kd in component BioEnv_TFSAssociation (per_second).
 * CONSTANTS[4] is deltaTFS in component BioEnv_TFSAssociation (per_second).
 * CONSTANTS[5] is deltaTF in component BioEnv_TFSAssociation (per_second).
 * ALGEBRAIC[0] is Jassociation in component BioEnv_TFSAssociation (uM_per_second).
 * CONSTANTS[6] is gammaPhzMS in component Device_PhzMSgenerator (uM).
 * CONSTANTS[7] is betaPhzMS in component Device_PhzMSgenerator (uM_per_second).
 * ALGEBRAIC[1] is JPhzMS in component Device_PhzMSgenerator (uM_per_second).
 * CONSTANTS[8] is gammaTF in component Device_PhzMSgenerator (uM).
 * CONSTANTS[9] is betaTF in component Device_PhzMSgenerator (uM_per_second).
 * CONSTANTS[10] is feedbackOn in component Device_PhzMSgenerator (dimensionless).
 * ALGEBRAIC[4] is Jgain_PhzMS in component BioEnv_PhzMStoPYO_interface (uM_per_second).
 * CONSTANTS[16] is Jgain_PYO in component BioEnv_PhzMStoPYO_interface (uM_per_second).
 * STATES[2] is PhzMS in component BioEnv_PhzMStoPYO (uM).
 * STATES[3] is PYO in component BioEnv_PhzMStoPYO (uM).
 * CONSTANTS[11] is deltaPhzMS in component BioEnv_PhzMStoPYO (per_second).
 * CONSTANTS[12] is alphaPYO in component BioEnv_PhzMStoPYO (per_second).
 * CONSTANTS[13] is deltaPYO in component BioEnv_PhzMStoPYO (per_second).
 * ALGEBRAIC[2] is JPYOformation in component BioEnv_PhzMStoPYO (uM_per_second).
 * RATES[1] is d/dt TF in component BioEnv_TFSAssociation (uM).
 * RATES[0] is d/dt TFS in component BioEnv_TFSAssociation (uM).
 * RATES[2] is d/dt PhzMS in component BioEnv_PhzMStoPYO (uM).
 * RATES[3] is d/dt PYO in component BioEnv_PhzMStoPYO (uM).
 */
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
CONSTANTS[0] = 0.05;
STATES[0] = 0;
STATES[1] = 8.6207;
CONSTANTS[1] = 5;
CONSTANTS[2] = 1e6;
CONSTANTS[3] = 4e6;
CONSTANTS[4] = 3.851e-4;
CONSTANTS[5] = 5.8e-3;
CONSTANTS[6] = 5;
CONSTANTS[7] = 0.1;
CONSTANTS[8] = 4;
CONSTANTS[9] = 0.07;
CONSTANTS[10] = 1;
STATES[2] = 0;
STATES[3] = 0;
CONSTANTS[11] = 8.0225e-6;
CONSTANTS[12] = 1.3;
CONSTANTS[13] = 5.8e-1;
CONSTANTS[14] = CONSTANTS[0];
CONSTANTS[15] = 0.00000;
CONSTANTS[16] = 0.00000;
}
void
computeRates(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[0] =  CONSTANTS[2]*CONSTANTS[1]*STATES[1] -  CONSTANTS[3]*STATES[0];
RATES[0] = (ALGEBRAIC[0] -  CONSTANTS[4]*STATES[0])+CONSTANTS[15];
ALGEBRAIC[2] =  CONSTANTS[12]*STATES[2];
RATES[3] = (CONSTANTS[16] -  CONSTANTS[13]*STATES[3])+ALGEBRAIC[2];
ALGEBRAIC[1] = ( CONSTANTS[7]*STATES[0])/(CONSTANTS[6]+STATES[0]);
ALGEBRAIC[4] = ALGEBRAIC[1];
RATES[2] = ALGEBRAIC[4] -  CONSTANTS[11]*STATES[2];
ALGEBRAIC[3] = (CONSTANTS[10] != 0.00000 ? ( CONSTANTS[9]*STATES[0])/(CONSTANTS[8]+STATES[0]) : 0.00000);
ALGEBRAIC[5] = CONSTANTS[14]+ALGEBRAIC[3];
RATES[1] = (- ALGEBRAIC[0]+ALGEBRAIC[5]) -  CONSTANTS[5]*STATES[1];
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[0] =  CONSTANTS[2]*CONSTANTS[1]*STATES[1] -  CONSTANTS[3]*STATES[0];
ALGEBRAIC[2] =  CONSTANTS[12]*STATES[2];
ALGEBRAIC[1] = ( CONSTANTS[7]*STATES[0])/(CONSTANTS[6]+STATES[0]);
ALGEBRAIC[4] = ALGEBRAIC[1];
ALGEBRAIC[3] = (CONSTANTS[10] != 0.00000 ? ( CONSTANTS[9]*STATES[0])/(CONSTANTS[8]+STATES[0]) : 0.00000);
ALGEBRAIC[5] = CONSTANTS[14]+ALGEBRAIC[3];
}