Model Mathematics

Component: environment

Component: ERG

ddtimeERG=epsilonk_151+DRGJ_152-k_16ERG

Component: DRG

ddtimeDRG=epsilonk_17_ERG+DRGJ_172k_171+DRGJ_172-k_18DRG

Component: Kip1

ddtimeKip1=epsilonk_5-V_6Kip1-k_24CycDKip1+k_24rCycD_Kip1+k_10CycD_Kip1-k_25Kip1CycE+CycA+k_25rCycE_Kip1+CycA_Kip1+V_8CycE_Kip1+k_30Cdc20CycA_Kip1

Component: CycA_Kip1

ddtimeCycA_Kip1=k_25CycAKip1-k_25rCycA_Kip1-V_6CycA_Kip1-k_30Cdc20CycA_Kip1

Component: CycD_Kip1

ddtimeCycD_Kip1=k_24CycDKip1-k_24rCycD_Kip1-V_6CycD_Kip1-k_10CycD_Kip1

Component: CycE_Kip1

ddtimeCycE_Kip1=k_25CycEKip1-k_25rCycE_Kip1-V_6CycE_Kip1-V_8CycE_Kip1

Component: CycA

ddtimeCycA=epsilonk_29E2FAmass-k_30Cdc20CycA-k_25CycAKip1+k_25rCycA_Kip1+V_6CycA_Kip1

Component: CycB

ddtimeCycB=epsilonk_1_+k_1CycBJ_121+CycBJ_12-V_2CycB

Component: CycE

CycE_T=CycE+CycE_Kip1 ddtimeCycE=epsilonk_7_+k_7E2FA-V_8CycE-k_25CycEKip1+k_25rCycE_Kip1+V_6CycE_Kip1

Component: CycD

CycD_T=CycD+CycD_Kip1 ddtimeCycD=epsilonk_9DRG+V_6CycD_Kip1+k_24rCycD_Kip1-k_24CycD_Kip1-k_10CycD

Component: Cdc20

ddtimeCdc20=k_13IEPCdc20_T-Cdc20J_13+Cdc20_T-Cdc20-Cdc20k_14J_4+Cdc20-k_12Cdc20

Component: Cdc20_T

ddtimeCdc20_T=epsilonk_11_+k_11CycB-k_12Cdc20_T

Component: IEP

ddtimeIEP=k_31CycB1-IEPJ_31+1-IEP-k_32PPXIEPJ_32+IEP

Component: PPX

ddtimePPX=epsilonk_33-k_34PPX

Component: E2F

ddtimeE2F=k_22E2FT-E2F-k_23_+k_23CycA+CycBE2F

Component: Cdh1

ddtimeCdh1=k_3_+k_3Cdc201-Cdh1J_3+1-Cdh1-Cdh1V_4J_4+Cdh1

Component: GM

H=0ifRb_hypoRb_T>0.81otherwise ddtimeGM=k_27massH-k_28GM

Component: mass

ddtimemass=epsilonmuGM

Component: PP1_A

PP1_A=PP1_T1+K_21phi_ECycE+CycA+phi_BCycB

Component: Rb_hypo

Rb_hypo=Rb_T1+k_20lambda_DCycD_T+lambda_ECycE+lambda_ACycA+lambda_BCycBk_19_PP1_T-PP1_A+k_19PP1_A

Component: E2FA

E2FA=E2FE2FT-E2F_RbE2FT

Component: E2F_Rb

E2F_Rb=2E2FTRb_hypoE2FT+Rb_hypo+L+E2FT+Rb_hypo+L2-4E2FTRb_hypo

Component: V_2

V_2=k_2_1-Cdh1+k_2Cdh1+k_2__Cdc20

Component: V_4

V_4=k_4gamma_ACycA+gamma_BCycB

Component: V_6

V_6=k_6_+k_6eta_ECycE+eta_ACycA+eta_BCycB

Component: V_8

V_8=k_8_k_8psi_ECycE+CycA+psi_BCycB1J_8+CycE_T

Component: L

L=k_26rk_26+k_20k_26lambda_DCycD+lambda_ECycE+lambda_ACycA+lambda_BCycB

Component: rate_constants

Component: dimensionless_constants