Generated Code
The following is c_ida code generated by the CellML API from this CellML file. (Back to language selection)
The raw code is available.
/* There are a total of 18 entries in the algebraic variable array. There are a total of 4 entries in each of the rate and state variable arrays. There are a total of 14 entries in the constant variable array. */ /* * VOI is time in component environment (second). * STATES[0] is HCO3_int in component concentrations (mM). * STATES[1] is HCO3_ext in component concentrations (mM). * STATES[2] is Cl_int in component concentrations (mM). * STATES[3] is Cl_ext in component concentrations (mM). * ALGEBRAIC[6] is J_AE1_HCO3 in component AE1 (mM_per_s). * ALGEBRAIC[7] is J_AE1_Cl in component AE1 (mM_per_s). * ALGEBRAIC[10] is J_HCO3_influx in component AE1 (mM_per_s). * ALGEBRAIC[11] is J_Cl_influx in component AE1 (mM_per_s). * CONSTANTS[0] is K_HCO3_ext in component AE1 (mM). * CONSTANTS[1] is K_HCO3_int in component AE1 (mM). * CONSTANTS[2] is K_Cl_ext in component AE1 (mM). * CONSTANTS[3] is K_Cl_int in component AE1 (mM). * CONSTANTS[4] is P_HCO3_ext in component AE1 (per_s). * CONSTANTS[5] is P_HCO3_int in component AE1 (per_s). * CONSTANTS[6] is P_Cl_ext in component AE1 (per_s). * CONSTANTS[7] is P_Cl_int in component AE1 (per_s). * ALGEBRAIC[1] is beta_ext in component AE1 (dimensionless). * ALGEBRAIC[2] is beta_int in component AE1 (dimensionless). * ALGEBRAIC[3] is gamma_ext in component AE1 (dimensionless). * ALGEBRAIC[4] is gamma_int in component AE1 (dimensionless). * ALGEBRAIC[5] is sigma in component AE1 (per_s). * CONSTANTS[8] is x_Tmax in component AE1 (mM). * CONSTANTS[9] is K_I in component AE1 (mM). * ALGEBRAIC[0] is x_T in component AE1 (mM). * ALGEBRAIC[8] is x_ext in component AE1 (mM). * ALGEBRAIC[9] is x_int in component AE1 (mM). * ALGEBRAIC[12] is Jo_bm in component AE1 (mM_per_s). * ALGEBRAIC[13] is Ji_bm in component AE1 (mM_per_s). * ALGEBRAIC[14] is Js_bm in component AE1 (mM_per_s). * ALGEBRAIC[15] is Jo_cm in component AE1 (mM_per_s). * ALGEBRAIC[16] is Ji_cm in component AE1 (mM_per_s). * ALGEBRAIC[17] is Js_cm in component AE1 (mM_per_s). * RATES[0] is d/dt HCO3_int in component concentrations (mM). * RATES[1] is d/dt HCO3_ext in component concentrations (mM). * RATES[2] is d/dt Cl_int in component concentrations (mM). * RATES[3] is d/dt Cl_ext in component concentrations (mM). * There are a total of 0 condition variables. */ void initConsts(double* CONSTANTS, double* RATES, double *STATES) { STATES[0] = 26.0; STATES[1] = 26.0; STATES[2] = 1.0; STATES[3] = 114.0; CONSTANTS[0] = 198; CONSTANTS[1] = 198; CONSTANTS[2] = 50; CONSTANTS[3] = 50; CONSTANTS[4] = 1247; CONSTANTS[5] = 135; CONSTANTS[6] = 562; CONSTANTS[7] = 61; CONSTANTS[8] = 1; CONSTANTS[9] = 172; CONSTANTS[10] = 0.00000; CONSTANTS[11] = 0.00000; CONSTANTS[12] = 1.00000; CONSTANTS[13] = 0.00000; } void computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES, double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS) { resid[0] = RATES[0] - CONSTANTS[10]; resid[1] = RATES[1] - CONSTANTS[11]; resid[2] = RATES[2] - CONSTANTS[12]; resid[3] = RATES[3] - CONSTANTS[13]; } void computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC) { ALGEBRAIC[0] = CONSTANTS[8]/(1.00000+STATES[0]/CONSTANTS[9]); ALGEBRAIC[1] = STATES[1]/CONSTANTS[0]; ALGEBRAIC[2] = STATES[0]/CONSTANTS[1]; ALGEBRAIC[3] = STATES[3]/CONSTANTS[2]; ALGEBRAIC[4] = STATES[2]/CONSTANTS[3]; ALGEBRAIC[5] = (1.00000+ALGEBRAIC[1]+ALGEBRAIC[3])*( CONSTANTS[5]*ALGEBRAIC[2]+ CONSTANTS[7]*ALGEBRAIC[4])+ (1.00000+ALGEBRAIC[2]+ALGEBRAIC[4])*( CONSTANTS[4]*ALGEBRAIC[1]+ CONSTANTS[6]*ALGEBRAIC[3]); ALGEBRAIC[6] = (ALGEBRAIC[0]/ALGEBRAIC[5])*( CONSTANTS[5]*ALGEBRAIC[2]*CONSTANTS[6]*ALGEBRAIC[3] - CONSTANTS[4]*ALGEBRAIC[1]*CONSTANTS[7]*ALGEBRAIC[4]); ALGEBRAIC[7] = - ALGEBRAIC[6]; ALGEBRAIC[8] = ( ALGEBRAIC[0]*( CONSTANTS[5]*ALGEBRAIC[2]+ CONSTANTS[7]*ALGEBRAIC[4]))/ALGEBRAIC[5]; ALGEBRAIC[9] = ( ALGEBRAIC[0]*( CONSTANTS[4]*ALGEBRAIC[1]+ CONSTANTS[6]*ALGEBRAIC[3]))/ALGEBRAIC[5]; ALGEBRAIC[10] = (ALGEBRAIC[0]/ALGEBRAIC[5])*CONSTANTS[4]*ALGEBRAIC[1]*( CONSTANTS[5]*ALGEBRAIC[2]+ CONSTANTS[7]*ALGEBRAIC[4]); ALGEBRAIC[11] = (ALGEBRAIC[0]/ALGEBRAIC[5])*CONSTANTS[6]*ALGEBRAIC[3]*( CONSTANTS[5]*ALGEBRAIC[2]+ CONSTANTS[7]*ALGEBRAIC[4]); ALGEBRAIC[12] = pow( (1.00000/ALGEBRAIC[0])*(1.00000/CONSTANTS[4]+1.00000/CONSTANTS[5]+CONSTANTS[1]/( CONSTANTS[5]*STATES[0])), - 1.00000); ALGEBRAIC[13] = pow( (1.00000/ALGEBRAIC[0])*(1.00000/CONSTANTS[4]+1.00000/CONSTANTS[5]+CONSTANTS[0]/( CONSTANTS[4]*STATES[1])), - 1.00000); ALGEBRAIC[14] = pow( (1.00000/ALGEBRAIC[0])*(1.00000/CONSTANTS[4]+1.00000/CONSTANTS[5]), - 1.00000); ALGEBRAIC[15] = pow( (1.00000/ALGEBRAIC[0])*(1.00000/CONSTANTS[6]+1.00000/CONSTANTS[7]+CONSTANTS[3]/( CONSTANTS[7]*STATES[2])), - 1.00000); ALGEBRAIC[16] = pow( (1.00000/ALGEBRAIC[0])*(1.00000/CONSTANTS[6]+1.00000/CONSTANTS[7]+CONSTANTS[2]/( CONSTANTS[6]*STATES[3])), - 1.00000); ALGEBRAIC[17] = pow( (1.00000/ALGEBRAIC[0])*(1.00000/CONSTANTS[6]+1.00000/CONSTANTS[7]), - 1.00000); } void computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC) { } void getStateInformation(double* SI) { SI[0] = 1.0; SI[1] = 1.0; SI[2] = 1.0; SI[3] = 1.0; } void computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES, double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS) { }